Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I15
         (1044 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...    29   6.1  
03_01_0023 + 198414-198968                                             29   8.1  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     29   8.1  

>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 480 KVNIEXVPYFNAPIFLEKQ 536
           K+  E VPYFNAPI+L+ +
Sbjct: 70  KLTNEKVPYFNAPIYLQNK 88


>03_01_0023 + 198414-198968
          Length = 184

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/59 (30%), Positives = 19/59 (32%)
 Frame = -3

Query: 1042 GGXCFSXRRXGNGXGXRGVGXXLXXGEXGXGGXXXPEXXGPXKRFSGKGXXGGXXGXTG 866
            G  C S    G G G  G G     G  G GG       G      G G  G   G +G
Sbjct: 26   GCQCGSCPSPGGGGGGGGGGGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSG 84



 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/56 (30%), Positives = 18/56 (32%)
 Frame = -3

Query: 1012 GNGXGXRGVGXXLXXGEXGXGGXXXPEXXGPXKRFSGKGXXGGXXGXTGPSXXQIP 845
            G G G RG G     G  G GG       G      G G  GG     G    + P
Sbjct: 46   GGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGGGGRCP 101


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +3

Query: 921  GPQXSGXNXPPXPXSPXXKXXPTPRXPXPFPXRRXEKHXP 1040
            GP+  G    P P  P  K  P P+ P P P  +  K  P
Sbjct: 156  GPKP-GPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGP 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,507,121
Number of Sequences: 37544
Number of extensions: 362659
Number of successful extensions: 997
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3082779744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)