Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I14
         (1069 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.72 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.72
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 128 PXXXXPRPXGXPPPLLXGG*XGGP 199
           P    P P G PP  L GG  GGP
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 26.2 bits (55), Expect = 1.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 401 PXLXGAPPXXXPPPXPPXG 457
           P L  A P   PPP PP G
Sbjct: 574 PNLPNAQPPPAPPPPPPMG 592


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 449 GXXGGGXXGGXPPXGXGGEG 390
           G  GGG  GG P  G G  G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSG 220



 Score = 25.0 bits (52), Expect = 3.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 440 GGGXXGGXPPXGXGGEG 390
           GGG  GG  P G GG G
Sbjct: 215 GGGSSGGPGPGGGGGGG 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,477
Number of Sequences: 2352
Number of extensions: 4520
Number of successful extensions: 42
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 119218710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)