Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_I14
(1069 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.35
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 33 0.46
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.61
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.80
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.80
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.80
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 3.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 3.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 7.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 7.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 7.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 7.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 7.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 9.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 9.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.9
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP + G PP PPP PP G
Sbjct: 580 PPPPPMLGGPP---PPPPPPGG 598
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 32.7 bits (71), Expect = 0.46
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPPP + G P PPP PP
Sbjct: 41 PPPPPMCGCAPPPPPPPPPP 60
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.61
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXGXXXRXRP 478
PPPP + GAP PPP PP G +P
Sbjct: 105 PPPPPMFGAP----PPPPPPSGLGVAPQP 129
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.80
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 391 PSPPXPXGGXPPXXPPP 441
P PP P GG PP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 760 PPPPPPGGCPPP--PPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 392 PPPPXLXGAPP-XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 759 PPPPPPPGGCPP--PPPPPPPG 778
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXS--PPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG 749
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPP--XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPP 452
P PP P GG PP P PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.80
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 391 PSPPXPXGGXPPXXPPP 441
P PP P GG PP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 760 PPPPPPGGCPPP--PPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 392 PPPPXLXGAPP-XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 759 PPPPPPPGGCPP--PPPPPPPG 778
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXS--PPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG 749
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPP--XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPP 452
P PP P GG PP P PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.80
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 391 PSPPXPXGGXPPXXPPP 441
P PP P GG PP PPP
Sbjct: 342 PPPPPPPGGCPPPPPPP 358
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 343 PPPPPPGGCPPP--PPPPPPGG 362
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 392 PPPPXLXGAPP-XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPG 332
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 342 PPPPPPPGGCPP--PPPPPPPG 361
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXS--PPXXPPG 455
P PP P GG PP PP PPG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPG 332
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPP--XXXPPPXPPXG 457
PPPP G PP PPP PP G
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPG 349
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 390 PLPPXPXGGXPPXXSPPXXPP 452
P PP P GG PP P PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPP 345
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPP---PXPPXG 457
PPPP + G PP PP P PP G
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQG 731
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +2
Query: 392 PPPPXLXGAPP----XXXPPPXPPXG 457
PPPP G+PP PPP PP G
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXP--PPXPPXG 457
PPPP G+PP PP PP G
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTG 278
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 394 SPPXPXGGXPPXXPPP 441
SPP P G PP PPP
Sbjct: 288 SPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +2
Query: 392 PPPPXLXGAPP----XXXPPPXPPXG 457
PPPP G+PP PPP PP G
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXP--PPXPPXG 457
PPPP G+PP PP PP G
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTG 299
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 394 SPPXPXGGXPPXXPPP 441
SPP P G PP PPP
Sbjct: 309 SPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +2
Query: 392 PPPPXLXGAPP----XXXPPPXPPXG 457
PPPP G+PP PPP PP G
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXP--PPXPPXG 457
PPPP G+PP PP PP G
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTG 284
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 394 SPPXPXGGXPPXXPPP 441
SPP P G PP PPP
Sbjct: 294 SPPPPRAGSPPPPPPP 309
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.8 bits (54), Expect(2) = 3.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 803 PPXXXGRXVVFXXXPPPPPP 862
PP G V PPPPPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPP 654
Score = 22.2 bits (45), Expect(2) = 3.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 845 PPPPPPXS 868
PPPPPP S
Sbjct: 651 PPPPPPPS 658
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.8 bits (54), Expect(2) = 3.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 803 PPXXXGRXVVFXXXPPPPPP 862
PP G V PPPPPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPP 480
Score = 22.2 bits (45), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 845 PPPPPPXS 868
PPPPPP S
Sbjct: 477 PPPPPPPS 484
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
P PP GAPP PPP PP G
Sbjct: 799 PLPPISSGAPPP--PPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
P PP GAPP PPP PP G
Sbjct: 799 PLPPISSGAPPP--PPPPPPGG 818
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPP L G PP PP PP
Sbjct: 121 PPPMSLLGPPPFSVPPSVPP 140
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPP L G PP PP PP
Sbjct: 144 PPPMSLLGPPPFSVPPSVPP 163
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPP L G PP PP PP
Sbjct: 394 PPPMSLLGPPPFSVPPSVPP 413
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP G P PP PP G
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPG 340
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPPP + PP PPP P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRP 160
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
PPPP G P PP PP G
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPG 350
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Frame = +2
Query: 392 PPPPXLX----GAPPXXXPPPXP 448
PPPP L GAPP PPP P
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPP 256
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXGXXXRXRP 478
PPPP PP PP PP R P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXGXXXRXRP 478
PPPP PP PP PP R P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPP 326
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Frame = +2
Query: 392 PPPPXLX----GAPPXXXPPPXP 448
PPPP L GAPP PPP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Frame = +2
Query: 392 PPPPXLX----GAPPXXXPPPXP 448
PPPP L GAPP PPP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPPP A P PPP PP
Sbjct: 491 PPPPLPPIATPSSVPPPPPP 510
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPP 451
PPPP A P PPP PP
Sbjct: 498 PPPPLPPIATPSSVPPPPPP 517
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 392 PPPPXLXGAPPXXXPPPXPPXG 457
P PP L P PPP PP G
Sbjct: 318 PSPPLLPPVCPPAPPPPPPPIG 339
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 395 PPPXLXGAPPXXX-PPPXPP 451
PPP + G PP PPP PP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPP 1604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,552,918
Number of Sequences: 27780
Number of extensions: 167033
Number of successful extensions: 3120
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2856190974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -