Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I10
         (957 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033286-1|AAH33286.1|  305|Homo sapiens SCML4 protein protein.        31   8.2  
AL512592-2|CAI13630.1|  305|Homo sapiens protein ( Human DNA seq...    31   8.2  
AL096816-2|CAI42849.1|  305|Homo sapiens protein ( 00197, novel ...    31   8.2  
AK093571-1|BAC04198.1|  356|Homo sapiens protein ( Homo sapiens ...    31   8.2  
AK074125-1|BAB84951.1|  178|Homo sapiens FLJ00197 protein protein.     31   8.2  

>BC033286-1|AAH33286.1|  305|Homo sapiens SCML4 protein protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 223 SRGTREWEEGRSSALWDRTTMDYSVKPVTQXRFSNDEPGVX*PGXAYRHQGSL 381
           S   +E EEGR  ++   TT +Y V PV   R+S D          + H+GSL
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDT-----SASTFNHRGSL 232


>AL512592-2|CAI13630.1|  305|Homo sapiens protein ( Human DNA
           sequence from clone RP11-35D6 on chromosome 6 Contains
           part of a novel gene (FLJ00197).  ).
          Length = 305

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 223 SRGTREWEEGRSSALWDRTTMDYSVKPVTQXRFSNDEPGVX*PGXAYRHQGSL 381
           S   +E EEGR  ++   TT +Y V PV   R+S D          + H+GSL
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDT-----SASTFNHRGSL 232


>AL096816-2|CAI42849.1|  305|Homo sapiens protein ( 00197, novel SAM
           domain  ).).
          Length = 305

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 223 SRGTREWEEGRSSALWDRTTMDYSVKPVTQXRFSNDEPGVX*PGXAYRHQGSL 381
           S   +E EEGR  ++   TT +Y V PV   R+S D          + H+GSL
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDT-----SASTFNHRGSL 232


>AK093571-1|BAC04198.1|  356|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36252 fis, clone THYMU2002109, moderately
           similar to Homo sapiens Sex comb on midleg homolog 1
           isoform 1. ).
          Length = 356

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 223 SRGTREWEEGRSSALWDRTTMDYSVKPVTQXRFSNDEPGVX*PGXAYRHQGSL 381
           S   +E EEGR  ++   TT +Y V PV   R+S D          + H+GSL
Sbjct: 156 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDT-----SASTFNHRGSL 203


>AK074125-1|BAB84951.1|  178|Homo sapiens FLJ00197 protein protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 223 SRGTREWEEGRSSALWDRTTMDYSVKPVTQXRFSNDEPGVX*PGXAYRHQGSL 381
           S   +E EEGR  ++   TT +Y V PV   R+S D          + H+GSL
Sbjct: 58  SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDT-----SASTFNHRGSL 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,663,294
Number of Sequences: 237096
Number of extensions: 2380865
Number of successful extensions: 7324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7322
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)