Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I09
         (1099 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    28   0.17 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.90 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.8  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   8.4  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 0.17
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 169 YVQPGANIFPTEEKWPEKGEHFRFLVFGPFKMGPK 273
           ++ P  ++F  +   PEK  +  +  F PF  GP+
Sbjct: 452 HIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPR 486


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.90
 Identities = 15/47 (31%), Positives = 16/47 (34%)
 Frame = +2

Query: 539 QPHQXKPXXXPTPPXXXQPPPTQXPPXXXXXGPGXXPXFGGGXXGPP 679
           QP    P   P+P    Q P    PP      P   P  GG    PP
Sbjct: 15  QPSSGAPGPQPSPHQSPQAPQRGSPP-----NPSQGPPPGGPPGAPP 56


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 250 GPFKMGPKPGNWLKK 294
           G F+ GP PG  LKK
Sbjct: 250 GNFRAGPTPGTILKK 264


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 250 GPFKMGPKPGNWLKK 294
           G F+ GP PG  LKK
Sbjct: 165 GNFRAGPTPGTILKK 179


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 250 GPFKMGPKPGNWLKK 294
           G F+ GP PG  LKK
Sbjct: 484 GNFRAGPTPGTILKK 498


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +2

Query: 155 RLVGFTFNRGPTF-FQPKKNGPKRVNISGFWYLAPSK--WAR 271
           R V F    G  F F    +GP R NI  F  + P K  W R
Sbjct: 516 RKVDFEGLSGDKFKFDKNGDGPARYNIIHFKQIEPGKYEWVR 557


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 477 TQILFNNSRISRVTTIWPSFFVVSRNNLG 391
           T + F N  +S  TT+   F+++   N+G
Sbjct: 99  TPLTFVNDTVSFTTTVSARFWLMDCRNIG 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,834
Number of Sequences: 438
Number of extensions: 10024
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 36873306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)