Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I08
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0019 + 403078-404211                                             48   7e-06
05_03_0368 - 13127536-13128429                                         46   5e-05
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76...    30   2.0  
09_06_0188 - 21441377-21442201                                         28   8.2  

>09_01_0019 + 403078-404211
          Length = 377

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +2

Query: 170 DSSRAACKKCGYAGHLTFQCRNFIKI 247
           D +R AC+KCG  GHLTFQCRNF+ +
Sbjct: 102 DETRGACRKCGRVGHLTFQCRNFLSV 127


>05_03_0368 - 13127536-13128429
          Length = 297

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +2

Query: 170 DSSRAACKKCGYAGHLTFQCRNFI 241
           D +R  C+KCG  GHLTFQCRNF+
Sbjct: 86  DETRGGCRKCGRVGHLTFQCRNFL 109


>05_01_0112 -
           757514-758444,758525-758571,759074-759236,759861-760366
          Length = 548

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 167 KDSSRAACKKCGYAGHLTFQCRN 235
           K   R  C +CG AGHL  +C N
Sbjct: 523 KKKKRRTCYECGIAGHLASECPN 545



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = +2

Query: 155 NKIGKDSSRAACKK------CGYAGHLTFQCRN 235
           NKIG++S+ A  KK      CG  GHL+  C N
Sbjct: 452 NKIGEESNSAPSKKRRKCYECGIPGHLSSACPN 484


>09_06_0188 - 21441377-21442201
          Length = 274

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 149 IVNKIGKDSSRAACKKCGYAGHLTFQC 229
           I  ++ +D SR  C +CG  GHL+++C
Sbjct: 156 IRRRVYRDKSR--CYECGEEGHLSYEC 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,466
Number of Sequences: 37544
Number of extensions: 173377
Number of successful extensions: 486
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)