Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I08
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     27   0.96 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   2.2  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   2.2  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.9  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   6.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   6.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.9  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   8.9  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 152 VNKIGKDSSRAACKKCGYAGHLTFQCRNFIKIDPNKE 262
           V K   +S   AC  CG  GH    C+ F+  + + E
Sbjct: 64  VLKAKSESKPGACFFCGQPGHKKRDCKEFLNRESSGE 100


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 164 GKDSSRAACKKCGYAGHLTFQCRN 235
           G+D S+  C KCG  GH   +C N
Sbjct: 345 GQDRSKL-CIKCGQEGHKIRECPN 367


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 188 CKKCGYAGHLTFQCRNFIK 244
           C KCG +GH    C N +K
Sbjct: 299 CWKCGLSGHKKQACTNSVK 317



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 188 CKKCGYAGHLTFQCR 232
           C KC   GH ++ CR
Sbjct: 277 CYKCWKVGHTSYHCR 291


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 185 ACKKCGYAGHLTFQCRNFIK 244
           AC +CG  GHL   C   +K
Sbjct: 386 ACIRCGAEGHLAKDCNAEVK 405


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 188 CKKCGYAGHLTFQCRNFIK 244
           C +CG A H    C N +K
Sbjct: 258 CIRCGAANHKAVNCTNDVK 276


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 188 CKKCGYAGHLTFQCRNFIK 244
           C +CG  GH    C +++K
Sbjct: 500 CIRCGSEGHKARDCSSYVK 518


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 188 CKKCGYAGHLTFQCRNFIK 244
           C +CG  GH    C+N  K
Sbjct: 531 CIRCGLTGHKARSCQNEAK 549


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 185 ACKKCGYAGHLTFQCRNFIK 244
           AC +CG  GH    C + IK
Sbjct: 412 ACIRCGADGHYAKSCTSEIK 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,114
Number of Sequences: 2352
Number of extensions: 8501
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)