Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I08
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical ...    31   1.4  

>U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical
           protein C13F10.7 protein.
          Length = 222

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +2

Query: 185 ACKKCGYAGHLTFQCRNFIKIDPN 256
           ACK+CGY GHL FQCRN I++ PN
Sbjct: 77  ACKRCGYPGHLYFQCRNHIEVRPN 100


>AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical
           protein F42G8.7 protein.
          Length = 572

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 721 EYLFKNKDSSRLSKIXQFIHGIAV 650
           +Y+FKN++ SR SKI +F H I V
Sbjct: 320 DYVFKNQEESRKSKIVEFWHCIIV 343


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,847,238
Number of Sequences: 27780
Number of extensions: 189444
Number of successful extensions: 481
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)