Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_I05
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    29   6.7  
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143...    29   6.7  
04_03_0380 - 15150814-15152304                                         29   6.7  
04_03_0348 + 14735581-14737071                                         29   6.7  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  

>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 566 SSQRWRNPTGL*RYQAFPPWKLPSCALLFRPCRLPE 673
           SS+ + +P G+  +  FP   LPS +  ++P  LPE
Sbjct: 22  SSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>06_01_0185 -
           1437693-1437834,1437969-1438078,1438214-1438264,
           1438877-1439122,1439244-1439315,1439614-1439648,
           1439755-1439845,1440546-1440610,1440733-1440813,
           1441020-1441137,1441535-1441627,1441865-1441997,
           1442471-1442503,1443264-1443343,1443444-1443549,
           1443621-1443795,1443884-1443980,1444819-1445251,
           1445329-1445459,1446052-1446341,1446429-1447002
          Length = 1051

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 563 RSSQRWRNPTGL*RYQAFPPWKLPSCAL 646
           RS +RWR+   +  + AF     PSCAL
Sbjct: 321 RSRRRWRHAAAISSFSAFVAENAPSCAL 348


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 697 EGXKGGQVFR*AAGSEQESARGELPGG 617
           EG KG ++ R AAG ++ +AR   PGG
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGG 470


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 697 EGXKGGQVFR*AAGSEQESARGELPGG 617
           EG KG ++ R AAG ++ +AR   PGG
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGG 470


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 341 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGIT--XERTCEQKASKRPGTV 496
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,607,458
Number of Sequences: 37544
Number of extensions: 496734
Number of successful extensions: 1466
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)