Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_I02
(1046 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 35 0.084
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.084
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.084
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.084
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.34
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 33 0.34
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 33 0.34
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 33 0.34
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.45
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.59
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 32 0.59
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.78
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.78
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.78
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.78
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.78
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 1.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 1.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.4
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 1.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.8
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.8
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 3.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 3.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 30 3.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 3.2
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 30 3.2
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 30 3.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.2
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 29 4.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.2
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 29 4.2
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 25 4.9
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.5
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 5.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 5.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 7.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 7.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 7.3
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 25 8.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.6
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 9.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 9.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 9.6
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 9.6
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 35.1 bits (77), Expect = 0.084
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P+ P PP PP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 305 PPPP---PXTGXXXAPARXGXPAPPXPPXPP 388
PPPP P PA PP PP PP
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPP 504
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.084
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G P R G P PP PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPP---XPPXPP 388
G PPPPP G P R G P PP PP PP
Sbjct: 251 GSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPP 284
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPP---XPPXPP 388
PPPP TG P G P PP PP PP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 284 RGGGXXXPPPP---PXTGXXXAPARXGXPAPP---XPPXPP 388
R G PPPP P TG P G P P PP PP
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPP TG P P PP PP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP G P PP PP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.084
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G P R G P PP PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPP---XPPXPP 388
G PPPPP G P R G P PP PP PP
Sbjct: 272 GSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPP 305
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPP---XPPXPP 388
PPPP TG P G P PP PP PP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 284 RGGGXXXPPPP---PXTGXXXAPARXGXPAPP---XPPXPP 388
R G PPPP P TG P G P P PP PP
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPP TG P P PP PP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP G P PP PP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.084
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G P R G P PP PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPP---XPPXPP 388
G PPPPP G P R G P PP PP PP
Sbjct: 257 GSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPP 290
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPP---XPPXPP 388
PPPP TG P G P PP PP PP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 284 RGGGXXXPPPP---PXTGXXXAPARXGXPAPP---XPPXPP 388
R G PPPP P TG P G P P PP PP
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPP TG P P PP PP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP G P PP PP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP AP P PP PP P
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPP 638
Score = 32.7 bits (71), Expect = 0.45
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP PA PP PP PP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP AP P PP PP P
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPP 464
Score = 32.7 bits (71), Expect = 0.45
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP PA PP PP PP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.1 bits (72), Expect = 0.34
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G AP G P PP PP
Sbjct: 520 PPPPPMPG--MAPLSTGAPTPPPPP 542
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARX----GXPAPPXPPXPP 388
GG PPP P A A G P PP PP PP
Sbjct: 549 GGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 33.1 bits (72), Expect = 0.34
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPP 289
GG GG GG G P R P GGGGG PP
Sbjct: 616 GGPGGPGGGGGPPRG-----PGGGGGGGPTGPP 643
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GG PP P G P G PAPP PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPT--GPPAPPKPPAKP 652
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 33.1 bits (72), Expect = 0.34
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPP 289
GG GG GG G P R P GGGGG PP
Sbjct: 616 GGPGGPGGGGGPPRG-----PGGGGGGGPTGPP 643
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GG PP P G P G PAPP PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPT--GPPAPPKPPAKP 652
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 33.1 bits (72), Expect = 0.34
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GG PP PP T P P PP PP PP
Sbjct: 120 GGVPAPPNPPRT--CCPPPTPAAPPPPPPPPPP 150
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.7 bits (71), Expect = 0.45
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGG 304
GG GG GG G G+ ++GGGGG
Sbjct: 75 GGGGGSGGGGGGNNIGSLVGSLIGGGGG 102
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.59
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
G PPPP G P G P PP PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 32.3 bits (70), Expect = 0.59
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPP 289
G GG G AG P AGA GGG G PP
Sbjct: 181 GPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPP 213
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPPR 283
G G G AG P G P GGG PPPR
Sbjct: 280 GPDGAPGNAGAPGAPGEAGAPG-SGGGCDHCPPPR 313
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
A+GGG P PP G +P + G P P P
Sbjct: 163 AQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSP 195
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
G P P G APA+ G PP PP P
Sbjct: 145 GAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGP 176
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
A+GGG P PP G +P + G P P P
Sbjct: 163 AQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSP 195
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
P P G APA+ G PP PP P
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPGP 176
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P G P PP PP PP
Sbjct: 234 PPPPPLP-----PVGAGAPPPPPPPPPP 256
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G A P PP PP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPP 241
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P G P PP PP PP
Sbjct: 220 PPPPPLP-----PVGAGAPPPPPPPPPP 242
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G A P PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPP 227
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P G P PP PP PP
Sbjct: 220 PPPPPLP-----PVGAGAPPPPPPPPPP 242
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPP 379
PPPP G A P PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPP 227
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 287 GGGXXXPPPPPX-TGXXXAPARXGXPAPPXPPXPP 388
G G PP PP G P R G PP P PP
Sbjct: 149 GPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPP 183
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 287 GGGXXXPPPPPX-TGXXXAPARXGXPAPPXPPXPP 388
G G PP PP G P R G PP P PP
Sbjct: 149 GPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPP 183
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
G G PPPPP APA PAP P
Sbjct: 32 GAGVEAPPPPPPADAAPAPAPEPAPAPAPEAVP 64
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
G PPPPP G P G P P PP P
Sbjct: 294 GMWPPPPPPPPG--RTPGPPGMPGMPPPPPP 322
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P P P PP PP
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
G PPPPP G P G P P PP P
Sbjct: 304 GMWPPPPPPPPG--RTPGPPGMPGMPPPPPP 332
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPPP P P P PP PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G G PP PP P PP PP PP
Sbjct: 250 GPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPP 283
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G P P T +P G PP PP PP
Sbjct: 232 GQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPP 263
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPP 286
GG GG GG G G G GGG PPP
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPP 57
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPP 286
GG GG GG G G GG GG PPP
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
A GGG P PP G +P + G P P P
Sbjct: 161 AHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRP 193
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
G P P G APA G PP PP P
Sbjct: 143 GAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGP 174
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +2
Query: 284 RGG--GXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
RGG G PPPPP P R PP PP
Sbjct: 761 RGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 384 GXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPPRA 280
G GG GG P + P LGGGGG PP A
Sbjct: 40 GCGGGGGLALP-QLPPLSLPSLGGGGGCCPPPAPA 73
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
+R GG PPPPP P R P P PP P
Sbjct: 131 SRAGGSSPPPPPPPRVPRTPPPR--SPPPRRPPMTP 164
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 742 PPPPPPPGGLP-PISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 726 PPPPPPPG--GLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Frame = +2
Query: 290 GGXXXPPPP----PXTGXXXAPARX-GXPAPPXPPXPP 388
GG PPPP P +G P G PP PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 742 PPPPPPPGGLP-PISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 726 PPPPPPPG--GLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Frame = +2
Query: 290 GGXXXPPPP----PXTGXXXAPARX-GXPAPPXPPXPP 388
GG PPPP P +G P G PP PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPP 286
GG GG GG G G GGG G PPP
Sbjct: 35 GGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPP 68
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 325 PPPPPPPGGLP-PISGGPPPPPPPP 348
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP G P G P PP PP
Sbjct: 309 PPPPPPPG--GLPPITGGPPPPPPP 331
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Frame = +2
Query: 290 GGXXXPPPP----PXTGXXXAPARX-GXPAPPXPPXPP 388
GG PPPP P +G P G PP PP PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPP 379
PPPPP AP P PP PP
Sbjct: 1357 PPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
P PPP P+ P PP PP PP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +2
Query: 284 RGG--GXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
RGG G PPPPP P R PP PP
Sbjct: 761 RGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP P A A P PP PP PP
Sbjct: 186 GPAGPPGPAGPAGEDAAAPESPPGPPGPPGPP 217
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 375 GXGGAGXPXRAGAXXXPVLGGGGGXXXPPPR 283
G GG G R P +GGGGG PPP+
Sbjct: 248 GRGGGGNQNRQQVPTNP-MGGGGGYPQPPPQ 277
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GGG PPPPP APA P P P P
Sbjct: 35 GGGDAAPPPPPPADAAPAPA--PAPEPEAAPAAP 66
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
PPPP P P PP PP PP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPP 72
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXP 376
G G PPPPP APA G APP P
Sbjct: 28 GCGCGAPPPPPACAPPPAPA-CGGGAPPPP 56
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPP 286
GG GG G G P A P GG PPP
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP PP G AP G P PP P P
Sbjct: 224 GDSGPPGPP--GPPGAPGNDGPPGPPGPKGAP 253
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP PP G AP G P PP P P
Sbjct: 219 GDSGPPGPP--GPPGAPGNDGPPGPPGPKGAP 248
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP PP G AP G P PP P P
Sbjct: 219 GDSGPPGPP--GPPGAPGNDGPPGPPGPKGAP 248
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP G A P PP PP P
Sbjct: 542 PPPPPIAGLLAANG-TNVPIPPPPPPP 567
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
A G PPPPP P PP PP PP
Sbjct: 553 ANGTNVPIPPPPPPP----LPQNLSGAPPPPPPPPP 584
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
P P T P G P PP PP PP
Sbjct: 136 PCEPITPPPCKPCPQGPPGPPGPPGPP 162
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GGG P P P P PP PP PP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
P P T P G P PP PP PP
Sbjct: 136 PCEPITPPPWKPCPQGPPGPPGPPGPP 162
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 308 PPPPXTGXXXAPARXGXPAPPXPPXPP 388
P P T P G P PP PP PP
Sbjct: 136 PCEPITPPPCKPCPQGPPGPPGPPGPP 162
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PP PP AP PAPP PP PP
Sbjct: 479 PPSPP--SYVMAPMIRMAPAPPPPPMPP 504
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +2
Query: 287 GGGXXXPPPPPXTG---XXXAPARXGXPAPPXPP 379
GGG PPPPP G APA G P P
Sbjct: 25 GGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAP 58
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP P+ P P PP P
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAP 116
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP P G P PP PP P
Sbjct: 794 PPPPPPL----PPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP P G P PP PP P
Sbjct: 794 PPPPPPL----PPISSGAPPPPPPPPP 816
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXP-PXPP 388
PPPPP P P PP P P PP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMPCPP 83
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
P P G APA+ G PP PP P
Sbjct: 137 PGPKGPNGNPGAPAQPGGQGPPGPPGP 163
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXP 385
PPPPP + + P PP PP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPP 93
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 290 GGXXXPPPPPXTGXXXAPARXGXPAPPXPP 379
G P PPP T P G P+ P PP
Sbjct: 86 GASTPPTPPPSTFPTLPPLTFGTPSTPPPP 115
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 25.0 bits (52), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 353 GXPAPPXPPXPP 388
G P PP PP PP
Sbjct: 218 GAPTPPPPPPPP 229
Score = 22.6 bits (46), Expect(2) = 4.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 284 RGGGXXXPPPPP 319
+ GG PPPPP
Sbjct: 215 KSGGAPTPPPPP 226
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP P AP G P PP P P
Sbjct: 232 GPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 263
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = +2
Query: 305 PPPPPXTGXXXAPA----RXGXPAPPXPPXPP 388
PP PP PA G PA P PP PP
Sbjct: 159 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 190
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 293 GXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
G PP P AP G P PP P P
Sbjct: 231 GPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 262
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = +2
Query: 305 PPPPPXTGXXXAPA----RXGXPAPPXPPXPP 388
PP PP PA G PA P PP PP
Sbjct: 158 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 189
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGG 304
GG GG GG G G GGGGG
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPPRA 280
G G G AG P R G P L G G PP A
Sbjct: 164 GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEA 199
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPAPPXPPXPP 388
PP P P+ P PP PP PP
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPP 253
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +2
Query: 305 PPPPPXTGXXXAPARXGXPA--PPXPPXPP 388
PP PP P G P PP PP PP
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPPRA 280
G G G AG P R G P L G G PP A
Sbjct: 164 GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEA 199
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 305 PPPP---PXTGXXXAPARXGXPAPPXPPXPP 388
PPPP P PA PP PP PP
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPP 497
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GGG PPPP P G P P PP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 287 GGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXPP 388
GGG PPPP P G P P PP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 25.0 bits (52), Expect(2) = 8.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 353 GXPAPPXPPXPP 388
G P PP PP PP
Sbjct: 276 GLPGPPGPPGPP 287
Score = 21.8 bits (44), Expect(2) = 8.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 338 APARXGXPAPPXP 376
APA G P PP P
Sbjct: 239 APAPQGYPGPPGP 251
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 284 RGGGXXXPPPPPXTGXXXAPARXGXPAPPXPPXP 385
R G PPPPP T P P P P P
Sbjct: 91 RPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEP 124
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPP 289
GG GG GG G G GGGGG PP
Sbjct: 26 GGGGGGGGCGGGCGGGC------GGGGGCAPPP 52
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPP 289
GG GG GG G G GGGGG PP
Sbjct: 26 GGGGGGGGCGGGCGGGC------GGGGGCAPPP 52
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 281 ARGGGXXXPPPPPXTGXXXAPARXGXP-APPXPPXP 385
A G G PP PP PA G P PP P P
Sbjct: 152 AGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGP 187
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGG 304
GG GG GG G G GGGGG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 293 GXXXPPPPPXT-GXXXAPARXGXPAPP 370
G PP PP G AP R G P PP
Sbjct: 111 GPPGPPGPPGRDGRPGAPGRPGNPGPP 137
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 387 GGXGGXGGAGXPXRAGAXXXPVLGGGGGXXXPPPR 283
G G G AG P G P GGG PPPR
Sbjct: 270 GPDGAPGNAGAPGAPGEAGAPG-SGGGCDHCPPPR 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,090,140
Number of Sequences: 27780
Number of extensions: 144077
Number of successful extensions: 3063
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2662
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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