Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H23
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425...   182   4e-46
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315...   170   1e-42
02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335...   165   4e-41
02_01_0045 + 307058-307552,308670-308716,308779-308866,309664-30...    50   2e-06
08_02_0250 + 14772746-14773037,14773141-14773203,14773458-147736...    30   2.8  

>04_03_0871 -
           20441689-20441756,20442220-20442349,20442422-20442507,
           20444271-20444316,20444425-20444547,20445302-20445370
          Length = 173

 Score =  182 bits (442), Expect = 4e-46
 Identities = 92/136 (67%), Positives = 102/136 (75%)
 Frame = +2

Query: 95  RKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVK 274
           +K +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVK
Sbjct: 27  KKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 85

Query: 275 ADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXX 454
           ADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA            AQ          
Sbjct: 86  ADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 145

Query: 455 MKIGRIEDVTPVPSDS 502
           MKIGRIEDVTPVP+DS
Sbjct: 146 MKIGRIEDVTPVPTDS 161


>02_04_0100 -
           19730137-19730237,19731215-19731344,19731419-19731504,
           19732410-19732455,19732558-19732680,19732779-19732781
          Length = 162

 Score =  170 bits (413), Expect = 1e-42
 Identities = 92/150 (61%), Positives = 102/150 (68%), Gaps = 11/150 (7%)
 Frame = +2

Query: 86  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 265
           M+ RK     +E  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSGRKKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 60

Query: 266 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 445
           KVKADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 446 XXXMKIGRI-----------EDVTPVPSDS 502
              MKIGRI           EDVTPVP+DS
Sbjct: 121 RSGMKIGRIADDVLSIFCHTEDVTPVPTDS 150


>02_01_0469 -
           3359156-3359500,3359595-3359680,3359766-3359811,
           3359897-3360016,3360622-3360624
          Length = 199

 Score =  165 bits (401), Expect = 4e-41
 Identities = 85/129 (65%), Positives = 94/129 (72%)
 Frame = +2

Query: 86  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 265
           M+ RK +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSKRKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 59

Query: 266 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 445
           KVKADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA            AQ       
Sbjct: 60  KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 119

Query: 446 XXXMKIGRI 472
              MKIGRI
Sbjct: 120 RSGMKIGRI 128


>02_01_0045 +
           307058-307552,308670-308716,308779-308866,309664-309756,
           309788-309950,310554-310627,310889-310927
          Length = 332

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 251 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 343
           V GGMK+KAD DE+SPYAAML +QDVA  CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 251 VTGGMKVKADRDEASPYAAMLAAQDVA 331
           V GGM +K+D DE SP+ + +   D++
Sbjct: 166 VGGGMNIKSDCDEPSPHCSCVGQTDIS 192


>08_02_0250 +
           14772746-14773037,14773141-14773203,14773458-14773621,
           14774126-14774220,14774517-14774728,14774972-14775009,
           14775131-14775424,14775510-14775617
          Length = 421

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 358 GLAHKAPCYWWKQNKDPWSWCSVCTSGSCSFKYEDWP 468
           G  H  PC+ W    + W WC    SG C   +  WP
Sbjct: 345 GKPHGWPCWGW-DGAEMWLWCQSKNSGHC---HIGWP 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,616,370
Number of Sequences: 37544
Number of extensions: 408349
Number of successful extensions: 812
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)