Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H21
(1143 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 34 0.22
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.5
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.6
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 4.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.6
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 6.1
AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical ... 29 8.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 8.1
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/78 (25%), Positives = 24/78 (30%)
Frame = -2
Query: 737 PXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXRXPXPXX 558
P PP+ PP + + PP P P PS P P
Sbjct: 435 PPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
Query: 557 VPTXXAPSSSXXPPXSXP 504
+P PSS PP P
Sbjct: 495 LPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/78 (25%), Positives = 24/78 (30%)
Frame = -2
Query: 737 PXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXRXPXPXX 558
P PP+ PP + + PP P P PS P P
Sbjct: 442 PPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
Query: 557 VPTXXAPSSSXXPPXSXP 504
+P PSS PP P
Sbjct: 502 LPPIATPSSVPPPPPPPP 519
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.38
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = -2
Query: 749 PXPXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXP---PPXPSXPRWXXLX 579
P P P P LPP G P+ PPP P PP P P
Sbjct: 726 PPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 578 RXPXPXXVPTXXAPSSSXXPPXSXP 504
P P P AP + P P
Sbjct: 782 GGPPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.38
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = -2
Query: 749 PXPXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXP---PPXPSXPRWXXLX 579
P P P P LPP G P+ PPP P PP P P
Sbjct: 726 PPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 578 RXPXPXXVPTXXAPSSSXXPPXSXP 504
P P P AP + P P
Sbjct: 782 GGPPPPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.38
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = -2
Query: 749 PXPXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXP---PPXPSXPRWXXLX 579
P P P P LPP G P+ PPP P PP P P
Sbjct: 309 PPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 578 RXPXPXXVPTXXAPSSSXXPPXSXP 504
P P P AP + P P
Sbjct: 365 GGPPPPPPPGMFAPMAPVIPDYLPP 389
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +1
Query: 538 GAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPXXXXXXG 717
G G G G G G GGG GGG G P G
Sbjct: 64 GCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCG 123
Query: 718 GRVGGXGXGXG 750
G GG G G G
Sbjct: 124 GGGGGCGGGCG 134
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 592 QRGXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPXXXXXXGGRVGGXGXGXGXW 756
QRG G GGG GGG G GGR G G G G +
Sbjct: 211 QRGGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGY 265
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = -2
Query: 656 PLEXXVXPPPXXPPPXPSXPRWXXLXRXPXPXXVPTXXAPSSSXXPP 516
P E PPP PPP P+ P P P P P+ + P
Sbjct: 369 PEELTTPPPPAPPPPAPAVPE-EAQAPTPAPEEAPEAQIPAETAQIP 414
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +1
Query: 487 VQTXAXGXXXGGXXEEEGAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSG 657
VQ+ G GG G G G G G G GGG GGG S G
Sbjct: 83 VQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGG 139
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 632 PPXXPPPXPSXPRWXXLXRXPXPXXVPTXXAPSSSXXP-PXSXP 504
P PP P+ P L P P P +PS+S P P S P
Sbjct: 498 PVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSP 541
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/86 (24%), Positives = 23/86 (26%)
Frame = +1
Query: 493 TXAXGXXXGGXXEEEGAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSGXAXEX 672
T + G GG G G G G G GGG GGG +G
Sbjct: 783 TGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGA 842
Query: 673 XXXXXXXPXXXXXXGGRVGGXGXGXG 750
G G G G G
Sbjct: 843 GDGNGGAGAGNGNGAGAGNGNGAGAG 868
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/84 (22%), Positives = 21/84 (25%)
Frame = -2
Query: 755 QXPXPXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXR 576
Q P P PP P P PPP PPP P+
Sbjct: 104 QHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHS 163
Query: 575 XPXPXXVPTXXAPSSSXXPPXSXP 504
P P + P P P
Sbjct: 164 APRPAYIEHSAPPPQPQYPQQQPP 187
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/60 (26%), Positives = 18/60 (30%)
Frame = -2
Query: 776 CRXRXXXQXPXPXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXP 597
C+ R P P P P + P P PPP P P PS P
Sbjct: 35 CQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 656 PLEXXVXPPPXXPPPXPSXPRWXXLXRXPXPXXVPTXXAPSSSXXPPXSXPXA 498
P V P P P P+ P P P P AP S+ P P A
Sbjct: 60 PAPASVQQQPEAPAPAPTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAA 112
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -2
Query: 743 PXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXR--XP 570
P P PP P S P PPP PP P R P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 569 XPXXVPTXXAPSSSXXPP 516
P P P+ S PP
Sbjct: 298 PPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -2
Query: 743 PXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXR--XP 570
P P PP P S P PPP PP P R P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 569 XPXXVPTXXAPSSSXXPP 516
P P P+ S PP
Sbjct: 319 PPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = -2
Query: 743 PXPXPPTLPPXXXXXXGXXXXXXXXSXAXPLEXXVXPPPXXPPPXPSXPRWXXLXR--XP 570
P P PP P S P PPP PP P R P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 569 XPXXVPTXXAPSSSXXPP 516
P P P+ S PP
Sbjct: 304 PPPPPPRGSPPTGSLPPP 321
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +1
Query: 520 GXXEEEGAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPX 699
G + E A T G G G G GGG GG T G
Sbjct: 4 GWSDSESAAKAKTGFGSGGGFGGGNNGGSGFGGGKNGG--TGFGGGNTG-GSGFGGGNTG 60
Query: 700 XXXXXGGRVGGXGXGXG 750
GG+ GG G G G
Sbjct: 61 GSGFGGGKAGGSGFGGG 77
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +1
Query: 520 GXXEEEGAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPX 699
G + E A T G G G G GGG GG T G
Sbjct: 4 GWSDSESAAKAKTGFGSGGGFGGGNNGGSGFGGGKNGG--TGFGGGNTG-GSGFGGGNTG 60
Query: 700 XXXXXGGRVGGXGXGXG 750
GG+ GG G G G
Sbjct: 61 GSGFGGGKTGGSGFGGG 77
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +1
Query: 520 GXXEEEGAXXVGTXXGXGXRXXXXQRGXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPX 699
G + E A T G G G G GGG GG T G
Sbjct: 4 GWSDSESAAKAKTGFGSGGGFGGGNNGGSGFGGGKNGG--TGFGGGNTG-GSGFGGGNTG 60
Query: 700 XXXXXGGRVGGXGXGXG 750
GG+ GG G G G
Sbjct: 61 GSGFGGGKTGGSGFGGG 77
>AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical
protein F16B4.7 protein.
Length = 85
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 598 GXEGXGGGXWGGGXTXXSSGXAXEXXXXXXXXPXXXXXXGGRV-GGXGXGXGXW 756
G G GGG +GGG + G GG GG G G G W
Sbjct: 29 GGYGGGGGDFGGGGSGGQWGSQSSSFQQSQSSGGFQNNAGGGFGGGMGPGGGGW 82
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 668 SXAXPLEXXVXPPPXXPPPXPSXP 597
S + PL PPP PPP P P
Sbjct: 817 SNSQPLSTLPPPPPPNPPPAPQPP 840
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,868,917
Number of Sequences: 27780
Number of extensions: 168836
Number of successful extensions: 1485
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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