Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H20
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 8e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.016
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.018
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.22
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.51
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPP 692
P P P PP P PPPP P PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPP-----XPPPXPXP 704
PP P P P P PP P P P PP PPP P P
Sbjct: 736 PPAVIVPTPAPAPIPVP----PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 600 PPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXP 704
PP P P P P P PPP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
PP P P PP PPPP AP PP PP P P S PS
Sbjct: 1699 PPQMSAPTPPPPPMS-----VPPPP--SAPPMPAGPPSAPPPPLPASSAPS 1742
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect(2) = 0.016
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
PP P P P P PP P P P P P P S PS
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP--SLPS 192
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 9/57 (15%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXP---------XPPXPPPXPXPXXS 713
PP P P P PPP AP P PP PP P P S
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 669 PXPPXPPPXPXPXXSXPS 722
P PP PPP P P + P+
Sbjct: 3 PAPPPPPPAPAPAAAAPA 20
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXP 704
PP P P PP P P PP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 23.0 bits (47), Expect(2) = 0.016
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 834 PXXXXXPSXPPPXSPLXPPP 893
P PS PP P PPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXX--APXXXPXPPXPPPXPXPXXSXP 719
PP P P P PP P AP P P PPP P P + P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 633 PPPPXXXAPXXXPXPP--XPPPXPXPXXSXPS 722
PPPP A P PP P P P S PS
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/107 (21%), Positives = 27/107 (25%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPSXXXXXXXXX 749
PP P PP PPP + PP PPP P S P+
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPP-LSSSRAVSNPPAPPP-AIPGRSAPALPPLGNASR 411
Query: 750 XXXXXXXXXXXXXXXXXXXXXXLXPXXXPXXXXXPSXPPPXSPLXPP 890
P P PP +P+ PP
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
PP P P P PP AP P PP P P P+
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 594 PXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
P PP P PP + PP PPP S P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 697 GXGGGXGGXGXXXGAXXXGGGGXXRXXXGXXGGXGXGXXXXGG 569
G GG GG G G GGG G GG G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 846 GXXEGXGXGXGGGXGGXXGGRGXXG 772
G G G GGG GG GGRG G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRG 51
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 852 GXGXXEGXGXGXGGGXGGXXGGRG 781
G G G G GG GG GGRG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRG 33
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 703 GXGXGGGXGGXGXXXGAXXXGGGGXXRXXXGXXGG 599
G G GG GG G GA G GG G GG
Sbjct: 37 GGGRGGARGGRGGRGGA-RGGRGGSSGGRGGAKGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 832 PLXXPXPPPPPLXXPLSXPPP 894
P P PPPPP P S PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 633 PPPPXXXAPXXXPXPPXPP 689
PPPP P P PP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPP 644
PP P P PP + PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 633 PPPPXXXAPXXXPXPPXPPPXP 698
PPPP P P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPPXXXAPXXXPXPPXPPPXPXP 704
PPP P P P PPP P P
Sbjct: 9 PPPPPPPPGFEP-PSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 844 PXPPPPPLXXPLSXPPP 894
P PPPP P PPP
Sbjct: 11 PPPPPPGFEPPSQPPPP 27
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXP----PPXPXPXXSXP 719
P P P P P + P AP P P P PP P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
PP PP P P P P P P PP P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP-PSTAPPVPTPSAGLP 1227
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 573 PXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
P P PP P P A P P PP P P + P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 573 PXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
P P P P P P A P P PP P P + P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 573 PXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
P P P P P P A P P PP P P + P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/54 (27%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXP----PPXPXPXXSXP 719
P P P P P + P P P P P PP P P + P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 573 PXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
P P PP P PP AP PP P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
PP PP P PP P P P PP P PS
Sbjct: 1012 PPVPKLSSKAPPV-PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
P P P P P PP + P P PP P P PS
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP--PPVPAPSSEIPS 1075
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 573 PXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
P P P P PP P A PP PPP P PS
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGV----PPVPPPSEAPPVPKPS 1204
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
PP PP P PP AP PP P P + P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXPS 722
PP PP P P P P PP P P PS
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +3
Query: 600 PPXXPXXXRXXPPPPXXXAPXXXPXPPXPPPXPXPXXSXP 719
PP P P P P P PP P P + P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 832 PLXXPXPPPPPLXXPLS 882
PL P PPPPP P S
Sbjct: 234 PLPAPPPPPPPTLPPQS 250
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 633 PPPPXXXAPXXXPXPPXPPPXPXPXXS 713
PP P PP PPP P S
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQS 250
Score = 20.6 bits (41), Expect(2) = 7.3
Identities = 9/30 (30%), Positives = 9/30 (30%)
Frame = +3
Query: 570 PPXXXXPXPXPPXXPXXXRXXPPPPXXXAP 659
PP P P PPPP P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 850 PPPPPLXXPLSXPP 891
PPPPP+ P + PP
Sbjct: 1883 PPPPPMALPKAGPP 1896
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,343,640
Number of Sequences: 5004
Number of extensions: 14573
Number of successful extensions: 254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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