Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H17
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 41 2e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.40
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.52
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.69
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 29 1.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 3.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.9
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 6.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/138 (24%), Positives = 37/138 (26%), Gaps = 3/138 (2%)
Frame = +1
Query: 436 IXSAKKXGXTPXKRAFLXLPPLTXXPXRGXGXPXPVXAPPXAPXKXGXKPGPXPXXNXXK 615
I S P A +PP+ P P A P P G P P P
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Query: 616 KGXXXGGXPXAPXLLXPPAXXAXXXXXXXXXXXXXXXRAPXXRXGXTPXP---GXXPPRG 786
G P + P A P G P P PP
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 787 XPXXXPPXPXPPVXPPPV 840
P PP P P V PPV
Sbjct: 1193 PPSEAPPVPKPSVGVPPV 1210
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +1
Query: 730 APXXRXGXTPXPGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXP-PXXKXAPPSQNP 903
AP P P PP P PP P P V PPV + P P APP P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 36.3 bits (80), Expect = 0.006
Identities = 37/149 (24%), Positives = 43/149 (28%), Gaps = 3/149 (2%)
Frame = +1
Query: 466 PXKRAFLXLPPLTXXPXRGXGXPXPVXAPPXAPXKXGXKPGPXPXXNXXKKGXXXGGXPX 645
P + + +PP+ P P P A P P G P P P G P
Sbjct: 1103 PVPKPSVAVPPVPA-PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 646 A-PXLLXPPAXXAXXXXXXXXXXXXXXXRAPXXRXGX-TPXPGXX-PPRGXPXXXPPXPX 816
P + PP P P P PP P PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 817 PPVXPPPVXRXXXTXXPPXXKXAPPSQNP 903
P PPV PP AP S+ P
Sbjct: 1222 PSAGLPPVP-VPTAKAPPV--PAPSSEAP 1247
Score = 31.1 bits (67), Expect = 0.23
Identities = 37/148 (25%), Positives = 39/148 (26%), Gaps = 9/148 (6%)
Frame = +1
Query: 493 PPLTXXPXRGXGXPXPVXAPPXAPXKXGXK----PGPXPXXNXXKKGXXXGGXPXAPXLL 660
PP+ P P P PP G P P P G P
Sbjct: 1032 PPIPV-PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 661 XPPAXXAXXXXXXXXXXXXXXXRAPXXRXGX-TPXPGXX-PPRGXPXXXPPXPXPPVXPP 834
PP P P P PP P PP P P V P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 835 PVXRXXXTXXPPXXK---XAPPSQNPXS 909
PV + PP K APP P S
Sbjct: 1151 PV--PAPSGAPPVPKPSVAAPPVPAPSS 1176
Score = 31.1 bits (67), Expect = 0.23
Identities = 33/148 (22%), Positives = 38/148 (25%), Gaps = 4/148 (2%)
Frame = +1
Query: 457 GXTPXKRAFLXLPPLTXXPXRGXGXPXPVXAPPXAPXKXGXKPGPXPXXNXXKKGXXXGG 636
G P + + PP+ P P P A P P G P P P G
Sbjct: 1119 GAPPVPKPSVAAPPVPV-PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 637 XPXAPXLLX--PPAXXAXXXXXXXXXXXXXXXRAPXXRXGXTPXPGXX-PPRGXPXXX-P 804
P P PP P P P PP P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Query: 805 PXPXPPVXPPPVXRXXXTXXPPXXKXAP 888
P P P P V + P +P
Sbjct: 1238 PVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/52 (46%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -2
Query: 904 GDFGXGGXFFXXGGXP*XXXGXP--VGGXPGGXXGG-GXXGGXPGGXXGXGW 758
G FG G F G P G P GG GG GG G GG PGG G GW
Sbjct: 224 GGFGGGPGGFEGG--PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/61 (36%), Positives = 23/61 (37%)
Frame = -2
Query: 832 GGXPGGXXGGGXXGGXPGGXXGXGWXXXPXGXWXPGFFXXFFXGGGXXGGXXXGRGXXGG 653
GG GG GGG G PG G+ G F GG GG G G GG
Sbjct: 187 GGGFGGF-GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGF---GGGPGGFEGGPGGFGG 242
Query: 652 G 650
G
Sbjct: 243 G 243
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 763 PGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAPPSQNP 903
P PP P P P PP+ PP P AP S NP
Sbjct: 237 PSSRPPERVPSLSAPAP-PPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 29.5 bits (63), Expect = 0.69
Identities = 33/148 (22%), Positives = 38/148 (25%), Gaps = 10/148 (6%)
Frame = +1
Query: 490 LPPLTXXPXRGXGXPXPVX-----APPXAPXKXGXKPG--PXPXXNXXKKGXXXGGXPXA 648
LPP P P+ APP P + G P P + P
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Query: 649 PXLLXPPAXXAXXXXXXXXXXXXXXXRAPXXRXGXTPXPGXXP--PRGXPXXXPPXPXPP 822
P P P P P P P G P P P P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAP 454
Query: 823 VXPP-PVXRXXXTXXPPXXKXAPPSQNP 903
+ PP P PP PP+ P
Sbjct: 455 IAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 684 PPXXPPPXKKXXKKPGXXXPXGXNXXPXPXSPP 782
PP PPP ++ KP + P P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 775 PPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAPPSQNPXS 909
PP G P PP PP PP + APP P S
Sbjct: 325 PPIGNGSSNSSLPPPP-PPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/53 (28%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Frame = +3
Query: 639 PKXXPPPXXPR-PXXXPPXXPPPXKKXXKKPGXXXPXGXNXXPXPXSPPGXPP 794
P PP P P PP PP P P P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 639 PKXXPPPXXPRPXXXPPXXPPP 704
P PPP P P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 633 GXPKXXPPPXXPRPXXXPPXXPPP 704
G P PPP P PP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 763 PGXXPPRGXPXXXPPXPXPPVXPPP 837
PG PP P P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 757 PXPGXXPPRGXPXXXPPXPXPP 822
P P PP P PP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.52
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -2
Query: 823 PGGXXG-GGXXGGXPGGXXGXGWXXXPXGXWXPGFFXXFFXGGGXXGGXXXGRGXXGGG 650
PG G GG GG G G G G G G G GG GRG GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 757 PXPGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAPP 891
P P PP P P PV PP + PP PP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/89 (25%), Positives = 24/89 (26%), Gaps = 1/89 (1%)
Frame = +3
Query: 639 PKXXPPPXXPRPXXXPPXXPPPXKKXXK-KPGXXXPXGXNXXPXPXSPPGXPPXXXXXXX 815
P P P P+ PP PP P P P P S P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAPV 181
Query: 816 XXXXXXTGXPXXXYGXPPXXKXXPPXPKS 902
P PP PP P S
Sbjct: 182 KSPPSAPSLPS---AVPPMPPKVPPPPLS 207
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +1
Query: 730 APXXRXGXTPXPGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAPPSQNPXS 909
AP P PPR P PP P P + PP + A P ++P S
Sbjct: 129 APPTPQSELRPPTSAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/67 (22%), Positives = 18/67 (26%)
Frame = +3
Query: 594 PPXKXRKKRXXXXGXPKXXPPPXXPRPXXXPPXXPPPXKKXXKKPGXXXPXGXNXXPXPX 773
PP + R P+ PP P P PP P + P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 774 SPPGXPP 794
P PP
Sbjct: 190 LPSAVPP 196
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = +1
Query: 757 PXPGXXPPRGXPXXXPPXPX--PPV---XPPPVXRXXXTXXPPXXKXAPPSQNP 903
P P PP P PP P PP+ PPP PP P + P
Sbjct: 145 PRPSIPPPS--PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 832 GGXPGGXXGGGXXGGXPGGXXG 767
GG PGG GG GG PGG G
Sbjct: 612 GGAPGGAP-GGMPGGAPGGAPG 632
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 844 GXPVGGXPGGXXGGGXXGGXPGG 776
G GG PGG GG GG PGG
Sbjct: 612 GGAPGGAPGGMPGGA-PGGAPGG 633
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 877 FXXGGXP*XXXGXPVGGXPGGXXGGGXXG 791
+ GG P G GG PGG GG G
Sbjct: 609 YQAGGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +1
Query: 532 PXPVXAPPXAPXKXGXKPGPXPXXNXXKKGXXXGGXPXAPXLLXPPAXXA 681
P P+ PP AP G P P P G G P P PPA A
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP------PGVAGAGPPPPPP--PPPAVSA 787
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +3
Query: 651 PPPXX--PRPXXXPPXXPPPXKKXXKKPGXXXPXGXNXXPXPXSPPGXP 791
PPP P P P PPP P P G P PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +2
Query: 665 PPPXXXPPPXXXXXXXXXXXXGXPXPXGXXX-PXXAXXPPGXXPXGXPPXPXPRXPPHRX 841
PPP PPP P P P PPG G PP P P PP
Sbjct: 732 PPP---PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP-PPP--PPPAV 785
Query: 842 XXXPLRXXPXXKKXPPXPKI 901
R + P PKI
Sbjct: 786 SAGGSRYYAPAPQAEPEPKI 805
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 733 PXXRXGXTPXPGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAP 888
P G P P PP G PP P PP PP V P + P
Sbjct: 754 PAPIMGGPPPP--PPPPGVAGAGPPPPPPP--PPAVSAGGSRYYAPAPQAEP 801
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 633 GXPKXXPPPXXPRPXXXPPXXPPP 704
G P PPP PP PPP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PGXXPPRGXPXXXPPXPXPPVXPP 834
P P + P PP P PP PP
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 775 PPRGXPXXXPPXPXPPVXPPP 837
PP P P P PP PPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 8/75 (10%)
Frame = -2
Query: 808 GGGXXGGXPGGXXGX--------GWXXXPXGXWXPGFFXXFFXGGGXXGGXXXGRGXXGG 653
GGG GG GG G G+ G PG F F GGG GG
Sbjct: 135 GGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGG 194
Query: 652 GXXLGSPXXKXLFXR 608
P + R
Sbjct: 195 SRPSQPPAQNEVITR 209
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 763 PGXXPPRGXPXXXPPXPXPPVXPPPVXRXXXTXXPPXXKXAPPSQNP 903
P PP PP P PPP P PPS P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 651 PPPXXPRPXXXPPXXPPPXKKXXKKPGXXXP 743
PPP P PP PPP P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 835 VGGXPGGXXGGGXXGGXPGGXXG 767
+ G PGG GGG G PGG G
Sbjct: 76 LNGQPGGP-GGGPGEGFPGGGFG 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.146 0.488
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,935,473
Number of Sequences: 5004
Number of extensions: 27327
Number of successful extensions: 186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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