Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H14
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379...    29   4.9  
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     29   4.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380           28   8.5  
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624...    28   8.5  

>05_04_0206 +
           19034259-19035462,19036870-19037045,19037752-19037975,
           19038133-19038914,19039337-19039494
          Length = 847

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 619 IPGVSPLEXPSCALLVPEPCPLTGIPGP 702
           +PGVSP      A+++P P P+  +P P
Sbjct: 104 VPGVSPTSAAVDAMMMPPPPPIDTLPPP 131


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -3

Query: 750 GVGYEEGATLPEGEKGRTRYSGKRAGFGN----QESAXGXFQGGNAW 622
           G GYE G     G  GR   SG   G G      ES  G  +GGN W
Sbjct: 82  GGGYESGGGRGYGGGGRGYESGGGRGPGGGGRGHESGGGGGRGGNVW 128


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 303 NESAN---ARGEAVCVLGALPLPRSLTRCAR 386
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380
          Length = 356

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 714 GEKGRTRYSGKRAGFGNQESAXGXFQGGNA 625
           GE+GR R  G+  G G  E+    ++GG A
Sbjct: 169 GERGRARRLGENGGNGGGEAGDCFYRGGEA 198


>01_01_0802 +
           6246267-6247541,6247625-6247682,6247806-6248129,
           6248321-6248355
          Length = 563

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +1

Query: 532 FSIGSAPLNEHHKNRTLXSEVAKPDRTIKIPGVSPLEXPSCALLVPEP 675
           FS+ S+P       R L +E+A+   T K     P   PS AL   +P
Sbjct: 57  FSLSSSPAARRELRRRLTAELAQVRATCKRLSSLPAPAPSSALSATDP 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,084,560
Number of Sequences: 37544
Number of extensions: 447428
Number of successful extensions: 1400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)