Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H10
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 305 1e-82
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 305 1e-82
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 305 1e-82
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 305 1e-82
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 305 2e-82
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 304 3e-82
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 303 5e-82
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 2e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 164 3e-40
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 81 5e-15
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 30 9.6
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 30 9.6
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (749), Expect = 1e-82
Identities = 150/251 (59%), Positives = 172/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (749), Expect = 1e-82
Identities = 150/251 (59%), Positives = 172/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (749), Expect = 1e-82
Identities = 150/251 (59%), Positives = 172/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 305 bits (749), Expect = 1e-82
Identities = 150/251 (59%), Positives = 172/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 2e-82
Identities = 150/251 (59%), Positives = 172/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 304 bits (746), Expect = 3e-82
Identities = 139/196 (70%), Positives = 156/196 (79%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 647 PGYDAESKXFNAEVHR 694
PGYD+ESK FNAEVHR
Sbjct: 188 PGYDSESKEFNAEVHR 203
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 303 bits (744), Expect = 5e-82
Identities = 149/251 (59%), Positives = 171/251 (68%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 466
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 467 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGGLNVPHSIXRF 646
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGGL++PHS RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 647 PGYDAESKXFNAEVHRGSHLWFACC*IHXKS*XX**GXFXETXXQVHKLXVPAXAIEAXY 826
PGYD+ESK FNAEVHR + + + Q K V +E Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 827 XKAHEAXRADP 859
KAH A R +P
Sbjct: 241 KKAHAAIRENP 251
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 2e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 107 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 286
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 287 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 400
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 164 bits (399), Expect = 3e-40
Identities = 75/125 (60%), Positives = 89/125 (71%)
Frame = +2
Query: 257 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 436
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 437 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMXGAVDGG 616
EYNVE +D PGAF CYLD GLARTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 617 LNVPH 631
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 81.0 bits (191), Expect = 5e-15
Identities = 45/99 (45%), Positives = 55/99 (55%)
Frame = +2
Query: 563 TTTGARVFGAMXGAVDGGLNVPHSIXRFPGYDAESKXFNAEVHRGSHLWFACC*IHXKS* 742
TTTG +VFGA+ GAVDGGL++PHS RFPGYD+ESK FNAEVHR +
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 743 XX**GXFXETXXQVHKLXVPAXAIEAXYXKAHEAXRADP 859
+ + Q K V +E Y KAH A R +P
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 99
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = -2
Query: 717 HANQRCEPLCTSALNXLDSAS*PGNLXME*GTLRPPSTAPXIAPKTRAPVVVRAKPTSK* 538
H ++ P+ + N + S++ + T++PP ++P R+ + +A P
Sbjct: 530 HTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHP 589
Query: 537 HLNAPGPL 514
H+ P PL
Sbjct: 590 HVYQPPPL 597
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = -2
Query: 717 HANQRCEPLCTSALNXLDSAS*PGNLXME*GTLRPPSTAPXIAPKTRAPVVVRAKPTSK* 538
H ++ P+ + N + S++ + T++PP ++P R+ + +A P
Sbjct: 530 HTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHP 589
Query: 537 HLNAPGPL 514
H+ P PL
Sbjct: 590 HVYQPPPL 597
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,248,013
Number of Sequences: 237096
Number of extensions: 2328090
Number of successful extensions: 4203
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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