Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H09
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...   171   8e-43
03_02_0021 - 5049705-5049713,5049744-5049770,5049877-5049940,505...    33   0.23 
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975...    29   4.9  
10_08_0669 + 19742140-19742189,19742886-19742923,19744260-197444...    28   8.6  
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278...    28   8.6  

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score =  171 bits (415), Expect = 8e-43
 Identities = 74/134 (55%), Positives = 103/134 (76%)
 Frame = +3

Query: 90  TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 269
           TVKDV   + VK  +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67

Query: 270 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 449
           Y+R  +GV    KI+GGR+RNG  P HFC+SSG+I+R  LQ L+ + +++    GGR++T
Sbjct: 68  YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127

Query: 450 TQGRRDLDRIAAQV 491
           +QGRRDLD++A +V
Sbjct: 128 SQGRRDLDQVAGRV 141


>03_02_0021 -
           5049705-5049713,5049744-5049770,5049877-5049940,
           5050019-5050806,5050888-5051046,5051778-5052419
          Length = 562

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 12  LPXRLTXGXPLRFASRLSTQGKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVK 191
           LP   T   P   A  ++T    RS + KD+ QDK + +      K+ +   P+HM +VK
Sbjct: 338 LPPNYTPATPPEKAFPMTTIYSSRSSSGKDLYQDKQLDSAKL---KSSEAAEPDHMVIVK 394

Query: 192 TARFKELAPY 221
               K++ P+
Sbjct: 395 EEEDKKIGPF 404


>05_05_0116 -
           22496535-22496576,22496974-22497058,22497468-22497545,
           22497656-22497803,22498612-22498771,22499056-22499058
          Length = 171

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 378 RKALQSLEALKL-VEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQQAKQXVIVL 536
           R AL++L+ + L ++++ DGG +L T+G    ++++A     A   A+Q + +L
Sbjct: 110 RTALENLDLILLCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQWINIL 163


>10_08_0669 +
           19742140-19742189,19742886-19742923,19744260-19744448,
           19746402-19748188
          Length = 687

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = +3

Query: 345 SHFCRSSGSIARKALQSL-----EALKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 509
           SH C S  S+ R+ LQS+     EA +L  + ++  R    Q + DLD +A ++ L  + 
Sbjct: 193 SHPCFSKNSLCRELLQSVAATLAEAAELGARCREPPRAGKLQMQSDLDALAGKLDLNLRD 252

Query: 510 QA 515
            A
Sbjct: 253 CA 254


>02_01_0385 +
           2783387-2783695,2784149-2785082,2785206-2785309,
           2785402-2785486,2785517-2787578,2787732-2787753,
           2788157-2788327,2791473-2791517,2792558-2793874,
           2793962-2794012,2794090-2794188,2794352-2794504,
           2794554-2794571
          Length = 1789

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 197 SCLYKIHVLRYLDFARFF*VS-SDSFNNLVLFNILYCDGTHL 75
           S +YK+ +LRYLD +     S S SFN+L+    L    T+L
Sbjct: 550 SSVYKLKLLRYLDASSLRISSFSKSFNHLLNLQALILSNTYL 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,589,887
Number of Sequences: 37544
Number of extensions: 334459
Number of successful extensions: 771
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)