Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H08
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    26   1.7  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     25   3.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   6.9  
DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    23   9.1  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   9.1  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 312 SHVLSCVIPLILWITVLPPLSELIPLAA 229
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -2

Query: 663 IRRSVRAE-PGGLVHTAPAWSE 601
           IR+++  E PG ++H + AWSE
Sbjct: 294 IRKAIGIEWPGYMIHESGAWSE 315


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 343 YGSWPFAGLLLTCSFLRYPPDSVDN 269
           +GSW + G ++    L+  PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189


>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 650 FGLNRGVWCTQPQLGAND 597
           F +N   WC + ++GAN+
Sbjct: 72  FQINNYYWCAEGKVGANE 89


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 650 FGLNRGVWCTQPQLGAND 597
           F +N   WC + ++GAN+
Sbjct: 72  FQINNYYWCAEGKVGANE 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,449
Number of Sequences: 2352
Number of extensions: 15995
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)