Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H07
(1236 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 3e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.027
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.062
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.33
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.58
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.1
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 5.4
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 7.1
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 9.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 143 PTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXP--PXXPXXPPXPXXXPXPP 316
PTP P P P P PP +P P P PP P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 317 XAXXPPPXPPL 349
A P P P+
Sbjct: 478 PAPAPAPAAPV 488
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +2
Query: 146 TPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXPP----XPXXXPXP 313
T P P P P P +P L PP P PP P P P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL-PPSAPIAPPLPAGMPAAPPLP 470
Query: 314 PXAXXPPPXPPLLXSXP 364
P A PPP P + P
Sbjct: 471 PAAPAPPPAPAPAPAAP 487
Score = 35.1 bits (77), Expect = 0.020
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 239 PPXSPSLXPPXXPXXPPXPXXXPX-PPXAXXPPPXPPLLXSXPPP 370
PP +P P P PP P P PP P PPL + P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPP-XPXXXPXPPXAXXPPPXPPLLXSXPP 367
P P P S + P P PP P P P PP PP + PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 34.3 bits (75), Expect = 0.035
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 221 PXXXPXPPXSP-SLXPPXXPXXP-PXPXXXPXPPXAXXPPPXPPLLXSXPP 367
P PP +P SL P P P P P PP A PP P + + PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPP 367
P P PSL P P PP P A PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPS-LPMGAPAAPPLPPSAPIAPP 458
Score = 29.9 bits (64), Expect = 0.76
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +1
Query: 283 PPXPPXXPX-PPXGAXPXPXPP-PPXLPXAPPXXXXXGGNPXXIXPEL 420
PP PP P PP A PP PP P PP P EL
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAEL 494
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPL 373
P PP PS PP P P PP + PP S P P+
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP--NSPPRPI 275
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAP 369
PP PP P PP P P P + P
Sbjct: 467 PPLPPAAPAPPPAPAPAPAAPVASIAELP 495
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/61 (26%), Positives = 20/61 (32%)
Frame = +3
Query: 801 KXPPPPXKXXXSKXTPPXXNXGKKXGGFXQKPXFFXXXKKQGGGGXXXFXXXGGXTPPPP 980
+ PPPP ++ PP N G P + G G PPPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGN-GSSNSSLPPPP----PPPRSNAAGSIPLPPQGRSAPPPP 364
Query: 981 P 983
P
Sbjct: 365 P 365
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXP---PXAXXPPPXPP 346
P PP S PP P P P P A PP PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 283 PPXPPXXPXP-PXGAXPXPXPPPPXLPXAPP 372
P PP P P GA P P PP P APP
Sbjct: 429 PSLPPSAPPSLPMGAPAAP-PLPPSAPIAPP 458
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 254 SLXPPXXPXXPPXPXXXPXPPXAXXPPPXPP 346
SL PP P P PP PP PP
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPL 373
P PP P PP P PP PP P PPPL
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP----PPRSAPSTGRQPPPL 379
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +1
Query: 808 PPPPQKXKXXXKPPPLXIXGKXRGVXXKNPPFFXXXKNRGGGDXXFFXQXXGXXPPPPP 984
PPPP + KPP G PP ++ G Q PPPPP
Sbjct: 313 PPPPPSRRNRGKPP--IGNGSSNSSLPPPPP---PPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPP 372
PP P PP P PP LP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +2
Query: 221 PXXXPXP---PXSPSLXPPXXPXXPPXPXXXPXPPXA 322
P P P P +P L PP P PP P P P A
Sbjct: 454 PIAPPLPAGMPAAPPL-PPAAPAPPPAPAPAPAAPVA 489
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 6/32 (18%)
Frame = +1
Query: 283 PPXPPXX------PXPPXGAXPXPXPPPPXLP 360
PP PP P PP G P PPP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXP---PPXPPLLXSXPPPL 373
P PP SP+ PP PP P P P P PP P L S PP+
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Score = 35.1 bits (77), Expect = 0.020
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 242 PXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIP 400
P PS+ PP PP P P P + PPP P PP +P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSL-PPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 34.3 bits (75), Expect = 0.035
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 221 PXXXPXPPXSPS-LXPPXXPXXPPXPXXXPXPPXAXXPPP--XPPLLXSXPPP 370
P P PP S L PP PP P P P + P P PP+ S PPP
Sbjct: 124 PPSAPAPPTPQSELRPP--TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 34.3 bits (75), Expect = 0.035
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +2
Query: 185 PXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXP-PXPXXXPXPPXAXXPPPXPPLLXSX 361
P P P PP SL PP P P P P P A PP PP +
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAV--PPMPPKV--P 202
Query: 362 PPPL 373
PPPL
Sbjct: 203 PPPL 206
Score = 33.1 bits (72), Expect = 0.082
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPPXXXXXGGNPXXIXP 414
PP P PP A P P PPP APP P + P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = +2
Query: 125 PPXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPX-SPSLXPPXXPXXPPXPXX 301
PP P P P P P P P P SP P PP P
Sbjct: 144 PPRPSIPPPSPASAPPI---PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 302 XPXPPXAXXP 331
P PP + P
Sbjct: 201 VPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 248 SPSLXPPXXPXXPPXPXXXPXPPXAXXP-PPXPPLLXSXPPPL 373
S S PP P PP P PP + P P PP + PP+
Sbjct: 119 SASAAPPSAP-APPTPQSELRPPTSAPPRPSIPPPSPASAPPI 160
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/66 (25%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 PTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXS-PSLXPPXXPXXPPXPXXXPXPPX 319
PT P P P P PP + P+ P P P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 320 AXXPPP 337
PPP
Sbjct: 200 KVPPPP 205
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 239 PPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXP---PLLXSXPPPL 373
PP +P+ P PP PP PPP P P + S PP+
Sbjct: 124 PPSAPAPPTPQSELRPPTSA----PPRPSIPPPSPASAPPIPSKAPPI 167
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 239 PPXSP-SLXPPXX--PXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIPXXS 409
PP P S PP P PP P P PP A P PP + PPPL +P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP--SAPPPPLPASSAPSVPNPG 1747
Query: 410 XRN 418
R+
Sbjct: 1748 DRS 1750
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPPXXXXXGGNPXXIXPEL 420
PP P PP + P P PPP +P P G P P L
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPP 367
P P S PP PP P P P PP PPL S P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP-PPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = +2
Query: 242 PXSPSLXPPXXPXXPPXPXXX----PXPPXAXXPPPXPPLLXSXPP 367
P P PP P P P PP + PPP P + + PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 257 LXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIP 400
+ P PP PP P P PP + PPP G P
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPP 346
P PP PP P P P P PP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLL 352
P P PP +P + P P PP P P P LL
Sbjct: 1711 PMSVPPPPSAPPM-PAGPPSAPPPPLPASSAPSVPNPGDRSALL 1753
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -2
Query: 368 GAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
G+ G GG G G G G GG GG G GGARG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -2
Query: 398 GFPPXXXXXGGAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
GF GG G GGG G GG G G G + G GGA+G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 35.5 bits (78), Expect = 0.015
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -1
Query: 366 GGXEXRRGGXGGGXXAXGGXGXXXGXGGXXGXXG--GXSEGEXGGXGXXXG 220
GG RGG GGG G G GG G G G G GG G G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 34.3 bits (75), Expect = 0.035
Identities = 21/41 (51%), Positives = 21/41 (51%)
Frame = -2
Query: 371 GGAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
GG G GG G G G A GG G G GG G GGARG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRG--GARGGRG--GRGGARG 55
Score = 33.1 bits (72), Expect = 0.082
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -1
Query: 366 GGXEXRRGGXGGGXXAXGGXGXXXGXGGXXGXXGGXSEGEXGGXGXXXG 220
GG RGG GG GG G GG G G + G GG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGG-----GRGGARGGGRGGARGGRGGRGGARG 55
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 371 GGAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGAR 252
GGA G GG G G G GG G GGA+
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.027
Identities = 27/82 (32%), Positives = 27/82 (32%)
Frame = -1
Query: 369 GGGXEXRRGGXGGGXXAXGGXGXXXGXGGXXGXXGGXSEGEXGGXGXXXGXXXXXXXGXX 190
GGG GG GG GG G G GG GG G GG G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG-GFGGGPGGFEG----GPGGFG 241
Query: 189 XGXXXXXXXXXGXGVGXXXXGG 124
G G G G GG
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGG 263
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 398 GFPPXXXXXGGAXGRXGGGGXGXGXAPXGGXGXXGGXGG 282
GF GG G GGG G G P G G GG GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 34.3 bits (75), Expect = 0.035
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 371 GGAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
GG G GG G G P G G GG GG GG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 33.1 bits (72), Expect = 0.082
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = -2
Query: 398 GFPPXXXXXGGAXGRXG-----GGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
G PP GG G G GG G G P G G GG GG GG G
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 33.1 bits (72), Expect = 0.082
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = -1
Query: 366 GGXEXRRGGXGGGXXAXGGXGXXXGXGGXXGXXGGXSEGEXGGXG 232
GG E GG GGG GG G GG G GG G GG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGG--LGGFGGGPGGFGG-GPGGHGGPG 272
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 368 GAXGRXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGGARG 249
G G GGG G P G G GG GG GG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -2
Query: 371 GGAXGRXGGGGXGXGXAPXGGXGXXGGXG--GXXAXGAGGARGXXAXXE 231
GG G GGG G P GG G GG G G G GG G E
Sbjct: 187 GGGFGGFGGGSGGPPPGP-GGFGGFGGFGGEGHHHGGHGGFGGGPGGFE 234
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.035
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPP 370
P PP + P P P P P PPP P + + PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 33.9 bits (74), Expect = 0.047
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPP 346
P P PP +P + P P PP PP PPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPPP 783
Score = 31.9 bits (69), Expect = 0.19
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 233 PXPPXSPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPP 370
P P +P PP P P P P A PP PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP----PPPP 783
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPP 372
PP PP P P P PPP + PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 286 PXPPXXPXPPXGAXPXPXPPPP 351
P PP P GA P P PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Frame = +1
Query: 286 PXPPXXPXPPXGAXPXPXPPP------PXLPXAPPXXXXXGGN 396
P P P P G P P PPP P P PP GG+
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 286 PXP-PXXPXPPXGAXPXPXPPPPXLPXAPP 372
P P P P P P P PPPP + A P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 304 PXPPXGAXPXPXPPPPXLPXAPPXXXXXGGNPXXIXP 414
P PP A P P P +P PP G P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +2
Query: 275 PXXPPXPXXXPXPPXA--XXPPPXPPLLXSXPPPLXXXXXGGIP 400
P PP P P A PPP P + PPP G P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +2
Query: 125 PPXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXPP 289
PP PTP P P P P PP PP P PP
Sbjct: 736 PPAVIVPTPAPAPI-------PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 23.0 bits (47), Expect(2) = 2.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 1161 PLXXXXPPPPPP 1196
P+ PPPPPP
Sbjct: 756 PIMGGPPPPPPP 767
Score = 23.0 bits (47), Expect(2) = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Frame = +3
Query: 1179 PPPPPPIXS---XXFFSPXP 1229
PPPPPP S +++P P
Sbjct: 778 PPPPPPAVSAGGSRYYAPAP 797
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLP 360
PP P P PP G P PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 221 PXXXPXPPXSPSLXPPXXPXXPPXP 295
P P PP P PP P PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 263 PPXXPXXPPXPXXXPXPPXAXXPPPXP 343
PP P PP P PP PPP P
Sbjct: 5 PPGNPPPPPPPPGF-EPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +2
Query: 275 PXXPPXPXXXP-XPPXAXXPPPXPP 346
P PP P P P + PPP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 1041 PPPXFFSPPXXXXPPP 1088
PPP F PP PPP
Sbjct: 13 PPPPGFEPPSQPPPPP 28
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 1179 PPPPPP 1196
PPPPPP
Sbjct: 24 PPPPPP 29
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.3 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 366 GGXEXRRGGXGGGXXAXGGXGXXXGXGGXXGXXGGXSEGEXGG 238
GG RGG GG GG GG G GG S G G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 29.9 bits (64), Expect = 0.76
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -2
Query: 371 GGAXGRXGG---GGXGXGXAPXGGXGXXGG-XGGXXAXGAGGARG 249
GG+ G GG GG G G G G GG GG GG RG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.33
Identities = 24/96 (25%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = +2
Query: 125 PPXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPX-SPSLXPPXXPXXPPXPXX 301
PP P P P P PP PS+ P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA--PSSGI 1178
Query: 302 XPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIPXXS 409
P P A PP PP + P P +P S
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPPXXXXXGGNPXXIXP 414
PP PP PP PP P APP G P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.9 bits (59), Expect = 3.1
Identities = 23/94 (24%), Positives = 26/94 (27%)
Frame = +2
Query: 128 PXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXPPXPXXXP 307
P P P P P P PP PS PP P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP--PSEAPPVPK---PSVGVPP 1209
Query: 308 XPPXAXXPPPXPPLLXSXPPPLXXXXXGGIPXXS 409
PP + PP P P P+ +P S
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 27.5 bits (58), Expect = 4.1
Identities = 25/105 (23%), Positives = 26/105 (24%)
Frame = +2
Query: 143 PTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXPPXPXXXPXPPXA 322
P P P P P P P P S S P P P P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPI---PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 323 XXPPPXPPLLXSXPPPLXXXXXGGIPXXSXRN*TXPLIXGGKTXP 457
PP P P P +P S P G P
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 PXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXSPSLXPPXXPXXPPXPXXXP 307
P P P P P P P P + P PP P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 308 XPPXAXXPPPXPPL-LXSXPPPL 373
PP PP+ + S PP+
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPV 1142
Score = 26.6 bits (56), Expect = 7.1
Identities = 24/112 (21%), Positives = 30/112 (26%), Gaps = 2/112 (1%)
Frame = +2
Query: 128 PXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPXS-PSLXPPXX-PXXPPXPXX 301
P P+ P P P P P PS+ P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 302 XPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIPXXSXRN*TXPLIXGGKTXP 457
P P + PP P + PP +P S P+ G P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 26.2 bits (55), Expect = 9.4
Identities = 24/93 (25%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = +2
Query: 125 PPXXXXPTPXPXXXXXXXXXPXXXPXXXXXXXPXXXPXPPX-SPSLXPPXXPXXPPXPXX 301
PP P P P P PP PS+ P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA-PSGAPP 1160
Query: 302 XPXPPXAXXPPPXPPLLXSXPPPLXXXXXGGIP 400
P P A P P P S PP+ G P
Sbjct: 1161 VPKPSVAAPPVPAP---SSGIPPVPKPAAGVPP 1190
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.58
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPP 372
P PP P A P P PPPP P PP
Sbjct: 221 PEIPPTYT--PKQADPLPAPPPPPPPTLPP 248
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -1
Query: 369 GGGXEXRRGGXG--GGXXAXGGXGXXXGXGGXXGXXGGXSEG 250
GGG RGG G GG GG G G G G + G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRG 487
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 221 PXXXPXPPXSPSLX-PPXXPXXPPXPXXXPXPPXAXXPPPXP 343
P P P PS+ PP P P P P PP A P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSV-PQPPVAPVAPEVP 617
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +2
Query: 233 PXPPXSPSL-XPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPL 373
P P +PS+ PP P P P P PP P L PPL
Sbjct: 656 PVVPEAPSVPQPPAAPVVPEVP-SVPQPPAVPVVPEAGQLNEPVVPPL 702
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 233 PXPPXSPSLXP-PXXPXXPPXPXXXPXPPXAXXPPPXP--PLLXSXPPP 370
P PP +P + P P P P P P PP P P + S P P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVP-VVPEAPSVPQPPAAPVVPEVPSVPQP 682
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 248 SPSLXPPXXPXXPPXPXXXPXPPXAXXPPPXPPLLXSXPPPL 373
SP++ P P PP P P P PPP PP+ S P +
Sbjct: 720 SPAIKPQVTPA-PPTP--APTPAVKHHPPP-PPVRSSISPSM 757
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 356 RXGGGGXGXGXAPXGGXGXXGGXGGXXAXGAGG 258
R GGG G P GG GG GG G GG
Sbjct: 110 RIGGGHHGPLHGPHGGF---GGRGGGRMGGRGG 139
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +2
Query: 239 PPXSPSLXPPXXPXXPPXPXXXP---XPPXAXXPPPXPPLLXSXPPP 370
PP P+L P P P P PP P ++ PPP
Sbjct: 108 PPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPP 154
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 283 PPXPPXXPXPPXGAXPXPXPPPPXLPXAPPXXXXXGGNP 399
PP P P A P P PPP P P NP
Sbjct: 582 PPEPLLSPTIDYSATPFPLEPPPESPG--PSLQIPSNNP 618
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 311 PPXAXXPPPXPPLLXSXPPP 370
PP PPP P + PPP
Sbjct: 27 PPRTMAPPPAPSRVQQAPPP 46
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,446,922
Number of Sequences: 5004
Number of extensions: 39071
Number of successful extensions: 496
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 671365334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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