Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H06
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    30   2.2  
06_03_1004 - 26832638-26833183,26833373-26833569,26833636-268338...    30   2.9  
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    29   5.1  

>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +3

Query: 705 PRPSTKTTSWXXXYQSPIPRFPXXPXPXRXRXR-XTPXARXXPKGEXPPXLP 857
           PRP T  +         +PRFP  P P   R     P     P    PP LP
Sbjct: 362 PRPPTMPSMQPDMLAPGVPRFPPPPPPPDTRPPFMAPGVNARPLPPPPPGLP 413


>06_03_1004 -
           26832638-26833183,26833373-26833569,26833636-26833861,
           26833943-26834072,26835884-26836188
          Length = 467

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 873 PPSXGQEGXGDXHPSGXXGXLGXPGGXHDXDXXPXGIVELGIGRXXTR 730
           PP+ G+EG G  +P G    L   GG    +    G+++  IG    R
Sbjct: 67  PPARGREGGGGGNPRGVEEALFDLGGEGGEEEEEEGMMDKSIGGSSAR 114


>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -1

Query: 303 LSMIRLLTTFWMMEPLPWL-----SYSKL*RTALS*SPVRMLLYSFSSRSWLEVSADSST 139
           L+++ L+   W + P   L     + S      L  SP   +  SF S +    S D++T
Sbjct: 36  LALLTLIMALWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTAT 95

Query: 138 TPALAASMHIANTTR 94
            P   A+  +A TTR
Sbjct: 96  VPTTTAAARVAATTR 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,836,678
Number of Sequences: 37544
Number of extensions: 469555
Number of successful extensions: 1267
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)