Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H03
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0830 + 25159758-25162460                                         29   3.7  
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588...    29   6.5  
11_06_0134 + 20454405-20455121                                         28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>06_03_0830 + 25159758-25162460
          Length = 900

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = -2

Query: 843 LPGIRGQPVGXERGVGATQPQVGGXDLPP--EXXYXQAXAMRKRXVSRKGER---ADRYP 679
           LPG  G P     GVG + P +G   +PP  E  Y           S +G R   A  +P
Sbjct: 799 LPGF-GVPTVPNLGVGTSHPSLGSRAIPPSSELSYFHPSMDLNYGRSYEGARREGASYWP 857

Query: 678 VSGQGR 661
           VS QG+
Sbjct: 858 VSFQGQ 863


>03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,
            5882570-5882618,5882703-5882941,5883073-5883174,
            5883634-5883862
          Length = 1529

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/67 (23%), Positives = 26/67 (38%)
 Frame = -2

Query: 861  WTSRR*LPGIRGQPVGXERGVGATQPQVGGXDLPPEXXYXQAXAMRKRXVSRKGERADRY 682
            W++R  + G   QP    +G   TQP      LPP     Q        +   G++  ++
Sbjct: 830  WSTRADVDG--KQPEHSTKGEDQTQPSAASQSLPPGHPSSQPTPFNSSEIDSTGQQTGQF 887

Query: 681  PVSGQGR 661
               G G+
Sbjct: 888  HQFGSGQ 894


>11_06_0134 + 20454405-20455121
          Length = 238

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3

Query: 710 PEREKGRTGIR*AARVGTGERTRGVSRGNAWYLYSPVG 597
           PEREK + G   AA   TGE  +G  R NAW  +  +G
Sbjct: 130 PEREKEKAGRGDAA---TGELGKGPKRENAWRGFHFIG 164


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,692,827
Number of Sequences: 37544
Number of extensions: 462387
Number of successful extensions: 1365
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)