Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H03
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    28   7.8  

>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 773 PPTWGCVAPTPRSXPTGCPLIPGNYRLE 856
           PP +    PTP S PT  PL+PGN R +
Sbjct: 226 PPVFPTSTPTPTSTPT--PLLPGNLRAD 251


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/61 (29%), Positives = 22/61 (36%)
 Frame = +2

Query: 647  CALLFRPWPLTGYLSALSPFRETWRFLIAHACXYXXSGGRSFPPTWGCVAPTPRSXPTGC 826
            C L    +PL    S  +P      F I+  C     GG      +G    TP   P GC
Sbjct: 2861 CNLAVCKFPLASCCSGFTPQSSGGTFCISLGCLGGFGGGCGSSCFFGLCLQTPIIQPIGC 2920

Query: 827  P 829
            P
Sbjct: 2921 P 2921


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/61 (29%), Positives = 22/61 (36%)
 Frame = +2

Query: 647  CALLFRPWPLTGYLSALSPFRETWRFLIAHACXYXXSGGRSFPPTWGCVAPTPRSXPTGC 826
            C L    +PL    S  +P      F I+  C     GG      +G    TP   P GC
Sbjct: 2861 CNLAVCKFPLASCCSGFTPQSSGGTFCISLGCLGGFGGGCGSSCFFGLCLQTPIIQPIGC 2920

Query: 827  P 829
            P
Sbjct: 2921 P 2921


>Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical
           protein K08C7.4 protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = -1

Query: 727 EKAPXFPKGRKGGQ-VSGKR-PGSEQESARGEFPGE 626
           EK+   P  +KGG+ V GK+ PGS++E+  GE+  +
Sbjct: 44  EKSTEKPVDKKGGRPVRGKKSPGSDEEAMDGEYEAD 79


>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 535 WKNASNAAFLRFLAFCXPFAHMF 467
           WKN  N  F  +   C PF H+F
Sbjct: 212 WKNTKNFCFDNYELECPPFEHLF 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,872
Number of Sequences: 27780
Number of extensions: 363342
Number of successful extensions: 945
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)