Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_H01
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0378 - 2946916-2947590                                           30   2.7  
02_03_0224 - 16577234-16577494,16577798-16577996,16578069-165781...    29   4.7  
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290...    29   6.2  
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    29   6.2  
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324...    28   8.1  

>12_01_0378 - 2946916-2947590
          Length = 224

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +3

Query: 21  HYREFLKIWQFVLG*HTGLDAPKMKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVV 200
           +YR  + +  +      G+    ++P +++L    ASL AA++ VP    + ++  +VV 
Sbjct: 70  YYRLAVNVTMYNPSGRAGVHYDAIRPRLLLLLAGGASLGAANATVPGVFHQPRMSTTVVA 129

Query: 201 ADYD 212
            D+D
Sbjct: 130 IDFD 133


>02_03_0224 -
           16577234-16577494,16577798-16577996,16578069-16578139,
           16578442-16578517,16578632-16578762,16578853-16578978,
           16579075-16579248,16579414-16579484,16579752-16579923,
           16581780-16581892,16582705-16582779,16582913-16583009,
           16583448-16583534,16583535-16583589,16583650-16583828
          Length = 628

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 228 SKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGSKEHRPGLFPS*VQTYLRR 401
           S+ + +  K E+I+ +++ +    ++NC E   ++W+Q S  H   L    +QT L++
Sbjct: 447 SRSITQMSKQELISGLLHYI---QQINCAEAMEKIWVQSSMPHFISLSLKQLQTILKK 501


>10_07_0045 +
           12328388-12328419,12328504-12328645,12328862-12329054,
           12329224-12329320,12329404-12329528,12329616-12329734,
           12331225-12331298,12331359-12331413,12331450-12331500,
           12331611-12331857,12331940-12332036,12332170-12332244,
           12334286-12334488,12334757-12334905,12334995-12335168,
           12335276-12335401,12335493-12335623,12335743-12335818,
           12335898-12336027,12336115-12336193,12336267-12336465,
           12336591-12336698,12336769-12337025,12337267-12337282
          Length = 984

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +3

Query: 252 KSEVITNVVNKLIRNNKMNCMEYAYQLWLQGSKEHRPGLFPS*VQTYLRR 401
           K E+I+ +++ +    ++NC E   ++W+Q S+ H   L    +QT L++
Sbjct: 771 KQELISGLLHYI---QQINCAEAMEKIWVQSSRPHYISLSLKQLQTILKK 817


>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
            2353031-2353708,2353800-2353964,2354139-2354433,
            2354581-2354795,2354885-2355190,2355269-2355332,
            2355426-2355665,2355783-2355886
          Length = 1505

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +1

Query: 58   LGNTQDSTLQR*SPL*LFYVFSWHLCMLQIPTSLTTFWRSSFTIASSSPITTV 216
            LG    +T+Q    + +    +W + +L +P ++   W   + IASS  +T +
Sbjct: 1059 LGGFASTTIQLLGIVAVMSKVTWQVLILIVPMAVACMWMQRYYIASSRELTRI 1111


>09_03_0179 -
           13131404-13131514,13131834-13131920,13132316-13132448,
           13133079-13133319,13133423-13133540,13133546-13133731,
           13133864-13134049,13134443-13134652,13135171-13135347,
           13135823-13135964,13136385-13136927,13137565-13138022
          Length = 863

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 317 VRLSTLAPGLQGTSSGIVSQLSS 385
           V L T++PG +GT SG+ S L+S
Sbjct: 681 VSLLTVSPGTEGTDSGLASVLNS 703


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,304,842
Number of Sequences: 37544
Number of extensions: 358206
Number of successful extensions: 1037
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)