Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_H01
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 30 1.8
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 30 1.8
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 29 3.1
U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical pr... 29 4.2
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 9.6
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 9.6
AF039720-13|AAB96705.1| 245|Caenorhabditis elegans Hypothetical... 28 9.6
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 204 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 314
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 204 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 314
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 272 CREQTDTKQQDELHGVRLSTLAPGLQGTSSGIVSQLS-SDLSSPKTRLSL 418
C +Q Q+ G LST+ L G+S+G +SQ + + KTRL+L
Sbjct: 321 CYDQIKRWMQEYKGGAELSTIERLLAGSSAGAISQTAIYPMEVMKTRLAL 370
>U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical
protein T12A2.15b protein.
Length = 222
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 493 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 591
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 493 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 591
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643
>Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical
protein C38C10.3 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 248 EEERSHHKCREQTDTKQQDELHGVRLSTLAPGLQ---GTSSGIVSQLSSDLSSPKTRLSL 418
E S++K ++ + Q++ L+ + G SSG+VSQ+SS SS + R +L
Sbjct: 56 ESPTSYNKYQKNVEPVQKENQKPKDLNKMTAGPHIAVKNSSGLVSQISSTTSSERKRRTL 115
Query: 419 CTSATVS 439
++ S
Sbjct: 116 ARPSSSS 122
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 84 PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 251
P +K +V LC+ +LY + S + + EQLY +SV A + ++ + + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 252 KSEVITNVVNKLIRNNKMNCMEYAY 326
+ E N++N + C+E AY
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAY 1004
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 84 PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 251
P +K +V LC+ +LY + S + + EQLY +SV A + ++ + + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 252 KSEVITNVVNKLIRNNKMNCMEYAY 326
+ E N++N + C+E AY
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAY 1004
>AF039720-13|AAB96705.1| 245|Caenorhabditis elegans Hypothetical
protein F33D11.11 protein.
Length = 245
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 101 SGLHLWSVESCVLPKNELPNLK 36
+G H + V+SCV P +LP+L+
Sbjct: 83 AGRHKFMVQSCVAPSEDLPDLE 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,416
Number of Sequences: 27780
Number of extensions: 300683
Number of successful extensions: 981
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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