Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G23
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +3

Query: 774 PHXKKTXXGXXPPPXXNPPXKXPFXEXRGAXXPXXXXPXXPXXXPPPP 917
           P   +T     PPP   PP   P  + R    P    P  P   PP P
Sbjct: 144 PRVPRTPPPRSPPPR-RPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = +3

Query: 786 KTXXGXXPPPXXNPPXKXPFXEXRGAXXPXXXXPXXPXXXPPPP 917
           KT     PPP  + P    F    G        P  P   PPPP
Sbjct: 427 KTPTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPP 470


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = +3

Query: 786 KTXXGXXPPPXXNPPXKXPFXEXRGAXXPXXXXPXXPXXXPPPP 917
           KT     PPP  + P    F    G        P  P   PPPP
Sbjct: 434 KTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPP 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,788,047
Number of Sequences: 27780
Number of extensions: 265560
Number of successful extensions: 632
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)