Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G20
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0120 + 25748882-25749297,25749411-25749600,25749682-257498...    29   4.8  
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094...    28   8.3  
01_06_1674 + 39072861-39073260,39073288-39073358,39073659-390737...    28   8.3  

>05_06_0120 +
           25748882-25749297,25749411-25749600,25749682-25749888,
           25750234-25750401,25751155-25751390,25751617-25751764
          Length = 454

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 277 FSRGKPI-SFQLTPKTCTWP 333
           +SRGKP+ S  L P++C WP
Sbjct: 273 YSRGKPLLSATLAPRSCDWP 292


>08_02_0797 +
           21307534-21307639,21307907-21308988,21309385-21309432,
           21309705-21310217
          Length = 582

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 554 KNERPQHFAEGKXTKSLVRRSSRNLASXVNGLRIRKPTRLGRAXYNKLCSMC 709
           K+E+  HF  G   ++ +RR+++ +AS    L I   T      ++ + S C
Sbjct: 425 KDEKDVHFTYGSVRQNGIRRATKGMASSKFCLNIAGDTPSSNRLFDAIVSHC 476


>01_06_1674 +
           39072861-39073260,39073288-39073358,39073659-39073716,
           39074604-39074659,39075179-39075400
          Length = 268

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 44  LSSDHLTELVGCLDNGSKIFHFDNPDLC 127
           L+ + L EL GCLD G    + + P+LC
Sbjct: 63  LTEEDLEELKGCLDLGFGFAYHEIPELC 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,417,415
Number of Sequences: 37544
Number of extensions: 508026
Number of successful extensions: 1053
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)