Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G19
(1133 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 36 0.059
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.73
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.7
09_02_0543 + 10427321-10428315,10428440-10429154 31 2.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 3.9
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 30 3.9
12_02_1174 - 26696869-26698191 29 5.1
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 5.1
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 5.1
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 5.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.8
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 9.0
08_01_0059 - 394001-394708 29 9.0
06_03_1310 + 29238644-29240260 29 9.0
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 9.0
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 29 9.0
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 35.9 bits (79), Expect = 0.059
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = -2
Query: 634 AGXPXXXGPGXXPPXXXXRGGPXPXRXXSXGXAGPRXXXPPAXSPPXSPXPXAXXXVGXX 455
A P P PP R P P + S P +PP +P P A
Sbjct: 69 ATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAP 128
Query: 454 XPXXAGPXPTP 422
P A P PTP
Sbjct: 129 SPYSA-PSPTP 138
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.73
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = -1
Query: 818 PAGAXGXXPLRXXXXGGXRPXXXXAAGGAXXRXXPXSXXXXXXRGPPPXXXSXXXAPRPX 639
PA PL RP AA A P PPP P P
Sbjct: 281 PASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPP 340
Query: 638 PRGXPXXXRAXSXXSPAP 585
P+G P A P P
Sbjct: 341 PKGPPPPPPAKGPPPPPP 358
Score = 29.1 bits (62), Expect = 6.8
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = -2
Query: 667 PRRXXLXAXXRAGXPXXXGPGXXPPXXXXRGGPXPXRXXSXGXAGPRXXXPPAXSPPXSP 488
PR A A P P P G P R S A PP PP P
Sbjct: 267 PRSSPSPAPAPAARPASPSPSLPLPP----GRESPSRPQSIAAAAVASPAPP---PPPPP 319
Query: 487 XPXAXXXVGXXXPXXAGPXPTPXXXP 410
P A P A P P P P
Sbjct: 320 KPAAAAPPPPPPPKAAPPPPPPKGPP 345
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = -2
Query: 634 AGXPXXXGPGXXPPXXXXRGGPXPXRXXSXGXAGPRXXXPPAXSPPXSPXPXAXXXVGXX 455
A P P PP +G P P GP PP P P P G
Sbjct: 324 AAPPPPPPPKAAPPPPPPKGPPPPPPAK-----GPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Query: 454 XPXXAGPXPTPXXXP 410
P G P P
Sbjct: 379 PPPPKGGASRPPAAP 393
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/88 (26%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = -1
Query: 287 EGLXGXXXPPXXXGXXXPXPXPLPPGXRXVXVXLXFGXSLXLPXPLXXSSXXPXXXXSXP 108
EG+ G PP G P P P G R + P P + P
Sbjct: 1143 EGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP 1202
Query: 107 XSPXPPXP---SLGXPXXSSGXWXPLXP 33
+P PP P G P G P P
Sbjct: 1203 GAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = -2
Query: 610 PGXXPPXXXXRGGPXPXRXXSXGXAGPRXXXPP-AXSPPXSPXPXAXXXVGXXXPXXAGP 434
P PP GP P S P PP A PP P + P +GP
Sbjct: 1133 PLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGP 1192
Query: 433 XPTPXXXP 410
P P P
Sbjct: 1193 PPQPAPPP 1200
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/90 (23%), Positives = 24/90 (26%)
Frame = -2
Query: 679 PXXXPRRXXLXAXXRAGXPXXXGPGXXPPXXXXRGGPXPXRXXSXGXAGPRXXXPPAXSP 500
P P+ A +G P P PP P + P P A
Sbjct: 18 PTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPS 77
Query: 499 PXSPXPXAXXXVGXXXPXXAGPXPTPXXXP 410
P SP P V P P P P
Sbjct: 78 PHSPSPSNAPWVAPAADIPPPPPPPPNPLP 107
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/93 (25%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Frame = -1
Query: 263 PPXXXGXXXPXPXPLPPGXRXVXVXLXFGXSLXLPXPL------XXSSXXPXXXXSXPXS 102
PP G P P PLPP G P PL + P + P +
Sbjct: 276 PPPPAGPPPPAPPPLPPSHHH-----HHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAA 330
Query: 101 PXPPXPSLGXPXXSSGXWXPLXPXXXXXXAXXP 3
P PP P+ +G P P A P
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRP 363
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 959 PAPPXPRXPXPXXPXXPXPPXXHXXPLA 1042
PAP PR P P P P PP LA
Sbjct: 32 PAPASPRSPVPPPPGVPPPPPPPPQTLA 59
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/90 (27%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Frame = -2
Query: 682 PPXXXPR-RXXLXAXXRAGXPXXXGPGXXPPXXXXRGGPXPXRXXSXGX--AGPRXXXPP 512
PP PR R + R P PP P P R S P+ PP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPP 183
Query: 511 AXSPPXSPXPXAXXXVGXXXPXXAGPXPTP 422
+ PP SP P P P P P
Sbjct: 184 SLQPP-SPPPPPPTRPPSVKPPVVQPKPQP 212
>08_02_1143 + 24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 959 PAPPXPRXPXPXXPXXPXPPXXHXXPLAXLP 1051
P+PP R P P P P PP P P
Sbjct: 710 PSPPHLRIPRPWPPPPPPPPRRRAEPTPERP 740
>02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 944 PRXXXPAPPXPRXPXPXXPXXPXPPXXHXXP 1036
P P PP P P P P P PP P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAP 385
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 944 PRXXXPAPPXPRXPXPXXPXXPXPP 1018
P P PP P P P P P PP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPP 377
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -2
Query: 598 PPXXXXRGGPXPXRXXSXGXAGPRXXXPPAXSPPXSPXP 482
PP P P S P PP+ +PP +P P
Sbjct: 16 PPPANQTAAPPPASNNSSSPPAPGSLSPPSLTPPAAPSP 54
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 959 PAPPXPRXPXPXXPXXPXPPXXHXXP 1036
P PP P P P P P PP P
Sbjct: 108 PPPPPPPSPPPSAPPPPPPPPTQPPP 133
>09_06_0107 + 20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 962 APPXPRXPXPXXPXXPXPPXXHXXPLAXLP 1051
APP P+ P P P P PP PL+ P
Sbjct: 72 APPPPQTP-PSPPPPPPPPPPPPPPLSPTP 100
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 944 PRXXXPAPPXPRX---PXPXXPXXPXPPXXHXXPLAXLP 1051
P P PP PR P P P P PP H P A +P
Sbjct: 30 PPIRPPPPPTPRPYAPPPPSHPLAPPPP--HISPPAPVP 66
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 944 PRXXXPAPPXPRXPXPXXPXXPXPPXXHXXPLAXLP 1051
PR P PP P P P P PP P + +P
Sbjct: 391 PRRTPPTPPPPSSPTPSH-LPPPPPTYSESPKSSMP 425
>06_03_0310 - 19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Frame = +2
Query: 959 PAPPXPRXPXPXXPXXPXPPXXH----XXPLAXLPXXAK 1063
PAPP P+ P P P P P P A LP +K
Sbjct: 171 PAPPPPQAPAPTPPQAPAPTPPRAPTPTPPQAPLPAPSK 209
>01_05_0501 + 22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 959 PAPPXPRXPXPXXPXXPXPP 1018
P+PP P P P P P PP
Sbjct: 74 PSPPPPPPPPPPPPPVPVPP 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.143 0.465
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,164,567
Number of Sequences: 37544
Number of extensions: 376169
Number of successful extensions: 1984
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3433095624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -