Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G17
         (1281 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   6.3  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   8.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   8.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 33/141 (23%), Positives = 35/141 (24%)
 Frame = +2

Query: 170 RXXXGGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPP 349
           R   GGGG  G     GG                      G    G     P   G    
Sbjct: 164 RSSSGGGGGGGG---GGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSG 220

Query: 350 XXXPGGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXR 529
              PGG  GGGG       R       G G       G GG         A P+     R
Sbjct: 221 GPGPGGGGGGGGRDRDHRDRDREREGGGNG------GGGGGGMQLDGRGNAIPSMVVDRR 274

Query: 530 XXXAXXDGEXXGXXXAGGXGG 592
              A  +    G     G GG
Sbjct: 275 GEDARGNIISDGGRIRSGDGG 295


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 15/58 (25%), Positives = 17/58 (29%)
 Frame = +1

Query: 220 GEXEXXGXTXXXXXXXXPXGAXERGKXXXGXXDXTRXXGAXPAXXXXGGXXGGXGXPG 393
           GE    G T        P  A E+G+         R     P      G  G  G PG
Sbjct: 290 GEKGDKGYTGPEGPPGEPGAASEKGQNGEPGVPGLRGNDGIPGLEGPSGPKGDAGVPG 347


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 182 GGGGAXGXERRXGGKXKXGGR 244
           GGGG  G   R GG+ +  GR
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGR 85


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 24/105 (22%), Positives = 28/105 (26%), Gaps = 2/105 (1%)
 Frame = +1

Query: 271 PXGAXERGKXXXGXXDXTRXXGAXPAXXXXG--GXXGGXGXPGRXXXEXXXEXXGGXGPX 444
           P GA   G+   G        G        G  G  G  G  G+   +      G  GP 
Sbjct: 399 PAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPE 458

Query: 445 XXXXXXAXRGEGEXXGXXGXARXXXXXKTXAXEXRRGXPXXPXXG 579
                   +GE    G  G             E  RG P  P  G
Sbjct: 459 GMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYG 503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.307    0.139    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,989
Number of Sequences: 2352
Number of extensions: 5939
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)