Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G17
(1281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.19
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 33 0.44
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.76
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.4
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 9.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/84 (27%), Positives = 23/84 (27%)
Frame = +2
Query: 344 PPXXXPGGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXX 523
PP GG GGGG GG G G G G G P
Sbjct: 57 PPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Query: 524 XRXXXAXXDGEXXGXXXAGGXGGG 595
G G GG GGG
Sbjct: 117 ACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 32.3 bits (70), Expect = 0.76
Identities = 35/137 (25%), Positives = 35/137 (25%)
Frame = +2
Query: 185 GGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXPG 364
GGG G GG GG G G G P PP G
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP-----PPPACGG 120
Query: 365 GXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXRXXXAX 544
G GGGG GG G G G GG G
Sbjct: 121 GCGGGGGGCGG--------GCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Query: 545 XDGEXXGXXXAGGXGGG 595
G G GG GGG
Sbjct: 173 GGGGGCGGGGGGGCGGG 189
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 33.1 bits (72), Expect = 0.44
Identities = 27/100 (27%), Positives = 32/100 (32%)
Frame = +2
Query: 98 RGGKRXXRKXXXXGDXXXXXXXXERXXXGGGGAXGXERRXGGKXKXGGRQXXSXXXXXXX 277
RGG R + G +R GGG G GG + G R
Sbjct: 19 RGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRGGF 78
Query: 278 GRXKGXKXXGXXTTXPXXRGRXPPXXXPGGXXGGGGXQGG 397
G +G G GR P GG G GG +GG
Sbjct: 79 G-GRGSPRGGFGGRGSPRGGRGSPR---GGRGGAGGMRGG 114
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGG G R G GG G +G G GR
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
Query: 362 GGXXGGGGXQGG 397
GG GGGG +GG
Sbjct: 119 GGRGGGGGGRGG 130
Score = 28.7 bits (61), Expect = 9.4
Identities = 24/86 (27%), Positives = 26/86 (30%)
Frame = +2
Query: 185 GGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXPG 364
GGG G R GG GGR G G GR G
Sbjct: 49 GGGGPGWGRGGGGSGWGGGR------GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGG 102
Query: 365 GXXGGGGXQGGXXXRXXXXXAXGXGQ 442
G GGGG +GG G G+
Sbjct: 103 GRGGGGGGRGGGGGGGGGRGGGGGGR 128
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Frame = +2
Query: 182 GGGGAXGXERRX--GGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXX 355
GGGG G R G GG G G G GR PP
Sbjct: 92 GGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGS 151
Query: 356 XPGGXXG--GGGXQGGXXXR 409
GG G GGG +GG R
Sbjct: 152 NGGGDWGGNGGGGRGGGGGR 171
Score = 29.9 bits (64), Expect = 4.1
Identities = 35/142 (24%), Positives = 36/142 (25%), Gaps = 4/142 (2%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKX-KXGGRQXXSXXXXXXXGRXKGXKXXGXXT---TXPXXRGRXPP 349
GGGG G GG + GGR G G G RG
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGR 101
Query: 350 XXXPGGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXR 529
G GGGG GG G G G G R P
Sbjct: 102 GDWGGNNNGGGGNWGGGGNNDG-----GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGD 156
Query: 530 XXXAXXDGEXXGXXXAGGXGGG 595
G G GG GGG
Sbjct: 157 WGGNGGGGRGGGGGRGGGGGGG 178
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.3
Identities = 47/212 (22%), Positives = 53/212 (25%)
Frame = -2
Query: 941 SPPSPPXXXXPXXXXSRXCXXPXPPXXGXXXXALPXPPXXXSPGXLXXAXXGASXXLXXR 762
SPP PP P + P PP +LP P SP A G+
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP---PPAGTGS------- 328
Query: 761 GXXPXPXXXXXRXPXXXXXRXXXXPXXPPRCGLPXXGXXXPLPXXQXCXAXXGXAPPPRX 582
P P R P P G P G + + G PR
Sbjct: 329 ---PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK-SSEESSESREG----PRG 380
Query: 581 XPXXGXXGXPRLXSXAXVXXXXXXRALPXXPXXSPSPLXAXXXXXXFGPXPPXXSXXXSL 402
P G G PR S R P P + PP S L
Sbjct: 381 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGL 440
Query: 401 XXRPGXPXPPXXPPXWXXAGXAPXXRVXSXXP 306
R P P G P R P
Sbjct: 441 PSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 472
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.3
Identities = 47/212 (22%), Positives = 53/212 (25%)
Frame = -2
Query: 941 SPPSPPXXXXPXXXXSRXCXXPXPPXXGXXXXALPXPPXXXSPGXLXXAXXGASXXLXXR 762
SPP PP P + P PP +LP P SP A G+
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP---PPAGTGS------- 349
Query: 761 GXXPXPXXXXXRXPXXXXXRXXXXPXXPPRCGLPXXGXXXPLPXXQXCXAXXGXAPPPRX 582
P P R P P G P G + + G PR
Sbjct: 350 ---PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK-SSEESSESREG----PRG 401
Query: 581 XPXXGXXGXPRLXSXAXVXXXXXXRALPXXPXXSPSPLXAXXXXXXFGPXPPXXSXXXSL 402
P G G PR S R P P + PP S L
Sbjct: 402 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGL 461
Query: 401 XXRPGXPXPPXXPPXWXXAGXAPXXRVXSXXP 306
R P P G P R P
Sbjct: 462 PSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 493
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.3
Identities = 47/212 (22%), Positives = 53/212 (25%)
Frame = -2
Query: 941 SPPSPPXXXXPXXXXSRXCXXPXPPXXGXXXXALPXPPXXXSPGXLXXAXXGASXXLXXR 762
SPP PP P + P PP +LP P SP A G+
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP---PPAGTGS------- 334
Query: 761 GXXPXPXXXXXRXPXXXXXRXXXXPXXPPRCGLPXXGXXXPLPXXQXCXAXXGXAPPPRX 582
P P R P P G P G + + G PR
Sbjct: 335 ---PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK-SSEESSESREG----PRG 386
Query: 581 XPXXGXXGXPRLXSXAXVXXXXXXRALPXXPXXSPSPLXAXXXXXXFGPXPPXXSXXXSL 402
P G G PR S R P P + PP S L
Sbjct: 387 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGL 446
Query: 401 XXRPGXPXPPXXPPXWXXAGXAPXXRVXSXXP 306
R P P G P R P
Sbjct: 447 PSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 478
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 33/138 (23%), Positives = 34/138 (24%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGGG G GG GG G G P PP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP------PPAPCG 80
Query: 362 GGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXRXXXA 541
GG GGGG GG G G G G G
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 140
Query: 542 XXDGEXXGXXXAGGXGGG 595
G +GG GGG
Sbjct: 141 GGSSGGCGGGSSGGCGGG 158
Score = 29.5 bits (63), Expect = 5.4
Identities = 32/138 (23%), Positives = 33/138 (23%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGG G GG G S G G G G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 362 GGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXRXXXA 541
GG GGGG GG G G G GG + G A
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCG--GGGSSGGGGYASAPSGGGGYATSGGGGSGGYA 245
Query: 542 XXDGEXXGXXXAGGXGGG 595
G G GGG
Sbjct: 246 TGGSSGGGYSSGGSSGGG 263
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 33/138 (23%), Positives = 34/138 (24%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGGG G GG GG G G P PP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP------PPAPCG 80
Query: 362 GGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXRXXXA 541
GG GGGG GG G G G G G
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 140
Query: 542 XXDGEXXGXXXAGGXGGG 595
G +GG GGG
Sbjct: 141 GGSSGGCGGGSSGGCGGG 158
Score = 29.5 bits (63), Expect = 5.4
Identities = 32/138 (23%), Positives = 33/138 (23%)
Frame = +2
Query: 182 GGGGAXGXERRXGGKXKXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGG G GG G S G G G G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 362 GGXXGGGGXQGGXXXRXXXXXAXGXGQXXAXXXGXGGARXRXAXXGAXPAXXXXXRXXXA 541
GG GGGG GG G G G GG + G A
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCG--GGGSSGGGGYASAPSGGGGYATSGGGGSGGYA 245
Query: 542 XXDGEXXGXXXAGGXGGG 595
G G GGG
Sbjct: 246 TGGSSGGGYSSGGSSGGG 263
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 29.9 bits (64), Expect = 4.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 396 PPWXPPPPXXPP 361
PPW PPPP PP
Sbjct: 122 PPWGPPPPGPPP 133
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 243 LPPXFXFPPXLLSXPXAPPPP 181
LPP PP L++ P PPPP
Sbjct: 510 LPPPGFVPPGLVAPPGLPPPP 530
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 185 GGGAXGXERRXGGKX-KXGGRQXXSXXXXXXXGRXKGXKXXGXXTTXPXXRGRXPPXXXP 361
GGG G + GG+ GG Q G +G G G P
Sbjct: 187 GGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGP 246
Query: 362 GGXXGGGGXQGG 397
GG GGGG GG
Sbjct: 247 GG-WGGGGRGGG 257
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 5.4
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 2/112 (1%)
Frame = -1
Query: 510 AGXAPXXAXLXLAPPXPXXXAXXWPXPXAXLXXXLXXXPPWXPPPPXX--PPGXXXGGXR 337
A A A +PP P A P P PP PPP PP G
Sbjct: 495 AAAAAAAAAAQKSPPTPPPPA---PGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLL 551
Query: 336 PLXSGXVVXXPXXFXPFXRPXXXXXXXLXXCLPPXFXFPPXLLSXPXAPPPP 181
V P P + L PP PP L P PPPP
Sbjct: 552 AANGTNVPIPPPPPPPLPQ-------NLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.7 bits (61), Expect = 9.4
Identities = 29/116 (25%), Positives = 31/116 (26%)
Frame = +1
Query: 343 PAXXXXGGXXGGXGXPGRXXXEXXXEXXGGXGPXXXXXXXAXRGEGEXXGXXGXARXXXX 522
P G G G PG+ GG GP GEG G G +
Sbjct: 149 PGEPGPPGPPGDAGNPGQSGHPGRNGNDGGVGPQGPPGPPGNNGEGGRDGPRG-EQGRPA 207
Query: 523 XKTXAXEXRRGXPXXPXXGXXRGGGAXPXXAXQXCXXGSGXXXPXXGSPXRGGXXG 690
T A G P P G P Q GS G P G G
Sbjct: 208 ISTPALPGDPGAPGEP------GPSGLPGDQGQAGRPGSDGAPGPQGPPGPPGQQG 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.139 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,872,793
Number of Sequences: 27780
Number of extensions: 193148
Number of successful extensions: 821
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
- SilkBase 1999-2023 -