Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G16
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0003 + 17055526-17056122                                         30   2.8  
09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335...    29   6.6  
05_03_0618 - 16262826-16263097,16263111-16263183                       28   8.7  
05_01_0239 - 1785699-1785980,1786061-1786284,1786380-1786526,178...    28   8.7  
03_02_0950 + 12661008-12662312,12662403-12662576                       28   8.7  
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464     28   8.7  

>05_04_0003 + 17055526-17056122
          Length = 198

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -1

Query: 216 SPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQWLSFESSHKHCQQNL* 37
           S +  ++ +C A+    L A+VA    A  AR  A      +A+  SF   HK C+++L 
Sbjct: 5   SSVLVVVAACLAAALVCLAANVA---PASCARATAALPHASIAETCSFVDDHKLCEESLS 61

Query: 36  GIP 28
            +P
Sbjct: 62  SLP 64


>09_04_0330 +
           16731390-16731699,16731774-16732080,16732182-16733561,
           16734064-16734112
          Length = 681

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 412 GEDHXKLDGGSKIGRFPFHPWSITXRRKSHGVLLPVFNQTLH 287
           G    +L  G   G   F  W     R S+GV LP + Q+LH
Sbjct: 217 GHMELRLLHGVAYGETWFGRWGYRYGRPSYGVALPSYRQSLH 258


>05_03_0618 - 16262826-16263097,16263111-16263183
          Length = 114

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 169 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 83
           S  C+CG+RS+R    +E +  +  LG V
Sbjct: 24  SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52


>05_01_0239 -
           1785699-1785980,1786061-1786284,1786380-1786526,
           1786667-1786775,1786880-1786981,1787090-1787164,
           1787277-1787453,1787534-1787623,1787717-1787844,
           1787909-1788356
          Length = 593

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 327 PMVFFFPFSIRRFTASLITSPFFSFRYSEHLPIAVS 220
           P V  FPF +RR T+  + +   S   SEH P A S
Sbjct: 30  PPVLPFPFPLRRLTSRRVFATSCSSSDSEHAPSASS 65


>03_02_0950 + 12661008-12662312,12662403-12662576
          Length = 492

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 173 DVLAEQLYMSVVIGEYETAIGKCSEYLKEKKGEVIKEAVKRLI-ENGKKNTMG 328
           +VL+ +      +GEY+ AI  CS+ L++ K  V     + L+ E+ +K  +G
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNVSVLVQRALLYESSEKYRLG 463


>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
          Length = 504

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 217 IRDRYRQML*ISEGKEGRGYQGSREASD*KREEEHHGTFAXQLWTKDGKEIV 372
           I+D+YR+M+    G  G  ++G R      R+      +  + W + G+  V
Sbjct: 166 IKDKYRRMVPRDRGSRGERFRGERFDKPEVRQWSRQENWGRKTWKEAGESTV 217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,621,132
Number of Sequences: 37544
Number of extensions: 409733
Number of successful extensions: 920
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)