Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G16
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical pr...    34   0.12 
DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated...    34   0.12 
AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical...    31   0.83 
U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucos...    29   5.8  
U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucos...    29   5.8  
DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide glyc...    29   5.8  
DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide glyc...    29   5.8  

>Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical
           protein C45B11.1a protein.
          Length = 522

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 282 SLITSPFFSFRYSEHLPIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 103
           ++I  P  SFRY+  LP  ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 102 S 100
           S
Sbjct: 136 S 136


>DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated
           kinase PAK-2 protein.
          Length = 522

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 282 SLITSPFFSFRYSEHLPIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 103
           ++I  P  SFRY+  LP  ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 102 S 100
           S
Sbjct: 136 S 136


>AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical
           protein Y71H2B.1 protein.
          Length = 143

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 191 LYMSVVIGEYE--TAIGKCSEYLKEKKGEVIKEAVKRLIE 304
           LYM   +G+Y+  TA+ KC +Y K+  G+   EA++  I+
Sbjct: 87  LYMQATVGDYDGNTAL-KCGQYWKKHSGKTQIEAIREYIK 125


>U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform c protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -1

Query: 225 VSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
           +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 11  LSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform b protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -1

Query: 225 VSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
           +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 11  LSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -1

Query: 225 VSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
           +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 11  LSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -1

Query: 225 VSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
           +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 11  LSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,576,154
Number of Sequences: 27780
Number of extensions: 331909
Number of successful extensions: 906
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)