Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G15
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.87
07_01_0479 + 3606663-3607448 31 1.5
08_01_0059 - 394001-394708 30 2.0
01_01_0070 - 542603-542686,542803-543441 30 2.7
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.5
12_02_1174 - 26696869-26698191 29 4.6
12_02_0299 - 17051570-17052474,17053542-17053755 28 8.1
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +1
Query: 508 GLKKTPPPXXXXGGPXXFXWEKNFFGXXPKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRG 687
G PPP G P ++ +G P PP+ P F PP PPP +
Sbjct: 17 GFPPQPPPMNPYGPPPP---QQPAYGHMP---PPQGAPPPFLAPPPPPPPGPPPPHQPQF 70
Query: 688 GXPPXFFXXXXPPP 729
P PPP
Sbjct: 71 NFGPGPPQQQQPPP 84
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 636 PPXXGXKKXPPPXXXXGGGPPXF-FXXXXPPPXXFSPQXFXXXXXXNFGPPXXFXPXPXF 812
PP G PPP G PP PPP P GPP P F
Sbjct: 13 PPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPH--QPQF 70
Query: 813 FXGXXPPKK 839
G PP++
Sbjct: 71 NFGPGPPQQ 79
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/73 (27%), Positives = 25/73 (34%)
Frame = +1
Query: 523 PPPXXXXGGPXXFXWEKNFFGXXPKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPX 702
PPP G P + NF P+ P ++ PP PPP+ PP
Sbjct: 54 PPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPP-----PPPPPYGVNSSQPP- 107
Query: 703 FFXXXXPPPKXFP 741
PPP P
Sbjct: 108 --PPPPPPPSPPP 118
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 583 GXXPKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFP 741
G P GP + P P PP R G PP F PPP P
Sbjct: 200 GPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGP 252
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 637 PPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXF 738
PP + P PF G PP F PPP F
Sbjct: 175 PPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPF 208
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 592 PKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFP 741
P PP++ P PP + PPP PP PPP P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHP 51
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +1
Query: 592 PKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFPXKXXXXXXXX 771
P P K P PP PPP PP PPP P +
Sbjct: 83 PPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPA 142
Query: 772 ILGPP 786
PP
Sbjct: 143 TTPPP 147
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 592 PKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPK 732
P PP K P P + PPP +GG PP PPPK
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP-------PPPK 383
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 592 PKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFP 741
P P P PP K PPP +G PP PPP P
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 604 PPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPP 729
PP PP K PPP +G PP PPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 592 PKXGPPKKXXPXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFP 741
P PP K P PP PPP PP PPP P
Sbjct: 138 PHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQP 187
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 622 PXFFXPPXXAXKKXPPPFXXRGGXPPXFFXXXXPPPKXFP 741
P + PP PPPF P F PPP FP
Sbjct: 222 PRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFP 261
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.147 0.497
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,906,513
Number of Sequences: 37544
Number of extensions: 443127
Number of successful extensions: 1042
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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