Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G11
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 36 0.060
05_02_0124 + 6849034-6851502 31 1.3
11_01_0385 + 2915532-2916482 31 1.7
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 30 2.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.9
07_03_1636 + 28290642-28291574 29 3.9
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 29 3.9
07_01_0862 - 7172083-7172931 29 5.2
06_03_1326 - 29355467-29355817 29 5.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 5.2
10_03_0023 - 7151465-7152111,7152222-7152405 29 6.9
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 9.1
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 35.5 bits (78), Expect = 0.060
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 631 PPWKAPSCXXLFRTLPPLPEYL-VPXFXPXPGXXXPFPHXPPP 756
PP P+ F LPPLP + +P F P P P P PPP
Sbjct: 290 PPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 631 PPWK-APSCXXLFRTLPPLPEYLVPXFXPXPGXXXPFPHXPP 753
PPW AP F LPP+ P P P PFP PP
Sbjct: 265 PPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPP 306
>05_02_0124 + 6849034-6851502
Length = 822
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 635 PGKLPRAPXCSEPCPLYPNTLFPPF 709
PGKLPR P P P PN+ FP +
Sbjct: 9 PGKLPRQPPPPPPPPSPPNSTFPRY 33
>11_01_0385 + 2915532-2916482
Length = 316
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/93 (31%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Frame = +1
Query: 538 PXAPPP*RASQNPTXSXKWRT-PTGLLKIQXFPPWKAPSCXXLFRTLPPLPEYLVPX-FX 711
P PPP A +P + KW P P W P + LPP P + P
Sbjct: 205 PFHPPPTPAWPHPGGN-KWPPLPPFPSHPPPTPAWPQPG--NKWPPLPPFPSHPPPTPAW 261
Query: 712 PXPGXXXP----FPHXPPPR*VXQXPXVRXVPL 798
P PG P FP PPP P + PL
Sbjct: 262 PHPGNQWPPLPPFPFHPPPMPAWPHPGNQWPPL 294
Score = 28.7 bits (61), Expect = 6.9
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Frame = +1
Query: 538 PXAPPP*RASQNPTXSXKWRTPTGLLKIQXFPPWKAPSCXXLFRTLPPLPEYLVPX-FXP 714
P PP + P KW P P W P + LPP P + P P
Sbjct: 184 PFNQPP--TPEWPHPGNKW-PPLPPFHPPPTPAWPHPG-GNKWPPLPPFPSHPPPTPAWP 239
Query: 715 XPGXXXP----FPHXPPPR*VXQXPXVRXVPL 798
PG P FP PPP P + PL
Sbjct: 240 QPGNKWPPLPPFPSHPPPTPAWPHPGNQWPPL 271
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 30.3 bits (65), Expect = 2.3
Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = +1
Query: 538 PXAPPP*RASQNPTXSXKWRTPTGLLKIQXFPPWKAPSCXXLFRTLPPLPEYLVPXFXPX 717
P PPP A QNPT + + +AP P+P + P
Sbjct: 4 PSRPPPPFAPQNPTPAPNPAASSLPASFSNLHVSRAPPPFAPPGGNGPVPSSIRAPQAPP 63
Query: 718 PGXXXPFPHXPPPR*VXQXPXVR-XVPLQ 801
PG PFP PPP P R P+Q
Sbjct: 64 PG-ARPFPGSPPPPSQPPPPFARPAAPVQ 91
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 676 PPLPEYLVPXFXPXPGXXXPFPHXPPP 756
P LP LVP P PG FP PPP
Sbjct: 643 PSLPNRLVPP-PPAPGIGNKFPAPPPP 668
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +2
Query: 575 PPQVXSGEPRQDY*RYXXFPPGKLPRAPXCSEPCPLYPNTLFPPFXPXREXXXPFPIXXP 754
PP P+ +Y PP P P C P P P PP P R P P P
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP-PPILPNRSVPPP-PPPPP 625
Query: 755 PV 760
P+
Sbjct: 626 PL 627
>07_03_1636 + 28290642-28291574
Length = 310
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 634 PWKAPSCXXLFRTLPPLPEYLVPXFXPXPGXXXPFPHXPPP 756
P P LF T PP P Y+ P P P P PPP
Sbjct: 149 PAPPPPPPQLFETAPPSPPYVPP--PPDAYLRKPSPPSPPP 187
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Frame = +2
Query: 632 PPGKLPRAPXC-----SEPCPLYPNTLFPPFXP 715
PP P P C S PC YP PP+ P
Sbjct: 136 PPAPAPAKPACGCPAWSSPCHCYPPPAMPPYPP 168
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +2
Query: 575 PPQVXSGEPRQDY*RYXXFPPGKLPRAPXCSEPCPLYPN---TLFPPFXPXREXXXPFPI 745
PP P + + FPP PR P PL P L+PP P ++ P P
Sbjct: 128 PPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPS 187
Query: 746 XXP 754
P
Sbjct: 188 PPP 190
>06_03_1326 - 29355467-29355817
Length = 116
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 755 GGG*WGKGXXXPGKGXKXGTRYSGKGGRVRNRXXHEGAFQGG 630
GGG GKG G G K G SG GGR G GG
Sbjct: 7 GGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKGGG 48
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 631 PPWKAPSCXXLFRTLPPLPEYLVPXFXPXPGXXXPFPHXPPP 756
PP AP +PP P L+P P P P P P P
Sbjct: 74 PPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLP 115
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 756 GGXXMGKGXXXSRXGXK-GGNKVFG*RGQGSEQXGARGSFPGGK 628
GG G G G + GG + +G G+G E G RG GG+
Sbjct: 70 GGGGRGYGGGGGGGGYESGGGRGYGGGGRGYESGGGRGPGGGGR 113
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 628 FPPWKAPSCXXLFRTLPPLPEYLVPXFXPXPGXXXPFPHXPPP 756
FP PS PP P L+P P P P P PPP
Sbjct: 204 FPTPSPPSILPPLTPQPP-PSSLIPPVLPLPLLNPPPPPPPPP 245
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 304 NESAN---ARGEAVCVLGALPLPRSLTRCAR 387
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,668,384
Number of Sequences: 37544
Number of extensions: 412111
Number of successful extensions: 1274
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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