Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G09
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.1  
12_02_1174 - 26696869-26698191                                         29   6.5  
11_01_0385 + 2915532-2916482                                           29   6.5  
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753...    28   8.6  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    28   8.6  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/44 (34%), Positives = 16/44 (36%)
 Frame = +1

Query: 739 PPXXPXPKKKXPPRXFFXPPPXXXSFFPXGXXPXXXXXXPXXPP 870
           PP  P PK   PP     PPP   +  P    P      P  PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 727 KKKXPPXXPXPKKKXPPRXFFXPPP 801
           K K PP  P P  + P + ++ PPP
Sbjct: 293 KPKPPPPSPPPPPQQPSQRYWTPPP 317


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = +1

Query: 742 PXXPXPKKKXPPRXFFXPPPXXXSFFPXGXXPXXXXXXPXXPP 870
           P  P P  K PP   F PPP      P G         P  PP
Sbjct: 191 PEWPHPGNKWPPLPPFHPPPTPAWPHPGGNKWPPLPPFPSHPP 233


>05_03_0031 -
           7534327-7534480,7535546-7535649,7535724-7535793,
           7535889-7535932,7536042-7536146,7536223-7536344,
           7536807-7536894,7536966-7537052,7537718-7537786,
           7537859-7538188,7539777-7539824,7540003-7540069,
           7540150-7540208,7541220-7541453,7541536-7541601,
           7541684-7541883,7542104-7542197,7542295-7542414,
           7542596-7542703,7542808-7542871,7543378-7543409,
           7546049-7548007
          Length = 1407

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 728 KKXPPLXXPPPKKXPPXGXFFXPPP 802
           ++ PP   PPP + PP      PPP
Sbjct: 72  EELPPCFAPPPMETPPPDPVSPPPP 96


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
 Frame = +1

Query: 721  QKKKKXPPXXPXPKKKXPP--RXFFXPPPXXXSFFPXGXXPXXXXXXPXXPP 870
            Q +K+ PP  P P    PP  R    PPP      P    P      P  PP
Sbjct: 959  QSEKRPPPPPPPPNVAPPPFTRQDIPPPPPSPPPLPI-TQPPSVPPPPNSPP 1009


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,316,141
Number of Sequences: 37544
Number of extensions: 281065
Number of successful extensions: 1186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)