Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G08
         (913 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U0L6 Cluster: Putative uncharacterized protein PFD034...    34   4.4  
UniRef50_Q8IIA3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q9U0L6 Cluster: Putative uncharacterized protein PFD0345c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFD0345c - Plasmodium falciparum
           (isolate 3D7)
          Length = 405

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 433 KKKKRLYH*YHITQFTISCEYLIHRLTSRVSLFYSAVIWKLDNIRLQL 290
           K   R Y+ YH  +F  SC + I +L   +S+FY  V  K +++ L L
Sbjct: 288 KYLNRNYYAYHKLKFFFSCTHFIKKLRYLLSIFYDVVYKKDEHLMLDL 335


>UniRef50_Q8IIA3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1316

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = +2

Query: 278 KLSH*LQSNVIEFPND-SAIEQAHTTS*SMYQIFT*YCKLCNMILVIETFFFFKLNSLAK 454
           K S+ L+ N  EF  D S   Q H    ++Y++ + Y  LC+   V +    FK   L +
Sbjct: 10  KPSYILKHNNNEFKIDISYFTQLHEHKINIYKLQSNYVNLCSSTYVNKIKLGFKYKLLNR 69

Query: 455 RCSEFAGHTGLRSRDYQLWNTSYYKCENHVN 547
              EFA H  +  R  ++   S+ K EN  N
Sbjct: 70  YLIEFA-HPFIHVRTIEINKKSFLKYENFDN 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,731,748
Number of Sequences: 1657284
Number of extensions: 9892503
Number of successful extensions: 17695
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17666
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)