Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G07
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 30 0.37
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 24 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.6
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 3.5
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 3.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.5
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 3.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.6
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 26 6.0
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 26 8.0
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 8.0
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 197 SLWSNLANEMQHLDDMMKELSLKFPSIINEGRV 295
+L S L LDD+ K L+L FP++I + RV
Sbjct: 167 ALQSQLVRVNGELDDLQKHLTLSFPTLIAKSRV 199
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 23.8 bits (49), Expect(2) = 0.76
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 844 PPPPPPP 864
PPPPPPP
Sbjct: 311 PPPPPPP 317
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 844 PPPPPPP 864
PPPPPPP
Sbjct: 337 PPPPPPP 343
Score = 23.8 bits (49), Expect(2) = 0.76
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 847 PPPPPPP 867
PPPPPPP
Sbjct: 337 PPPPPPP 343
Score = 21.0 bits (42), Expect(2) = 4.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 850 PPPPPP 867
PPPPPP
Sbjct: 361 PPPPPP 366
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 819 LAPXPXXXPPPPPPP 863
+A P PPPPPPP
Sbjct: 1 MASLPPGNPPPPPPP 15
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 821 GPXPXXXPPPPPPP 862
G P PPPPPPP
Sbjct: 17 GFEPPSQPPPPPPP 30
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 844 PPPPPPP 864
PPPPPPP
Sbjct: 24 PPPPPPP 30
Score = 21.8 bits (44), Expect(2) = 2.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 823 PPXXXXXPPPPP 858
PP PPPPP
Sbjct: 5 PPGNPPPPPPPP 16
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 826 PXXXXXPPPPPPPP 867
P PPPPPPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +1
Query: 481 ENHLPAEAKQPEDSKRPVA----EPTETXPTNVXREEME 585
EN +PAE + PE+ K P +P + P +V ++E
Sbjct: 54 ENAVPAEVQAPEEPKEPETVDNIDPADDDPNSVAAPKVE 92
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 176 ESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 355
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 356 VKAKN 370
K N
Sbjct: 163 SKKLN 167
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 823 PPXXXXXPPPPPPPP 867
P PPPPPPPP
Sbjct: 754 PAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 823 PPXXXXXPPPPPPPP 867
PP PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPP 767
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 823 PPXXXXXPPPPPPPP 867
PP PPPPPPP
Sbjct: 767 PPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 822 APXPXXXPPPPPPP 863
AP PPPPPPP
Sbjct: 755 APIMGGPPPPPPPP 768
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2
Query: 614 RPRTWLSVVNSISSRXTFVGXVSVGSATGLLLSSGCFASAGR*FSTRLSRKPSCLRNSHP 435
RP T + VNSISS F SV A G L++ A ++KP LR H
Sbjct: 94 RPNTANAFVNSISSDVPFDYSESVAEACGFDLNTRVLAFK---LDAPEAKKPVDLRTQHN 150
Query: 434 R 432
R
Sbjct: 151 R 151
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 821 GPXPXXXPPPPPPP 862
G P PPPPPPP
Sbjct: 939 GVMPAFPPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 844 PPPPPPPP 867
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 415 ENTEPSLGCEFRRQLGLRERRVENHLPAEAKQPEDSKRPVAEPTETXPTNVXREEME 585
+N S + +RQ LR+RR E AEA + E + A P + P N + E
Sbjct: 50 QNAAASGSKDAKRQEALRKRREEEKRAAEAAKAEVAALFNAIPKKQTPQNFLTRKEE 106
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 449 EGSWVYEKDVLKITFPLKQSSQRIARGQLQS 541
EGS E+DV K TF ++ S R +LQS
Sbjct: 329 EGSVANEEDVAKRTFHSREQSLLFLRHKLQS 359
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 8.0
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +2
Query: 194 HSLWSNLANEMQHLDD--MMKELSL-KFPSI-INEGRVEGDKYQISIHLPGY---EQKDI 352
H++ N A E ++D ++K +S F S+ + + R GD + I I + + I
Sbjct: 573 HTIVPNSAPEHPSINDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVI 632
Query: 353 NVKAKNGVLMVQANSAF 403
NV+A+ +LM Q S F
Sbjct: 633 NVRAERAILMSQGESPF 649
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,399,097
Number of Sequences: 5004
Number of extensions: 68446
Number of successful extensions: 466
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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