Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_G05
         (1132 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         30   2.9  
02_04_0029 + 19036176-19036481,19036602-19036733,19036814-190369...    29   5.1  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/49 (32%), Positives = 18/49 (36%)
 Frame = +2

Query: 674 LIPXTXXPPXXXXSYRGPXXFPFKXRXIGVPQP*XRIPLDEXXXPTPXP 820
           LIP    PP    +Y  P   P      G P P    P +    PTP P
Sbjct: 431 LIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEEPPEEPTPSP 479


>02_04_0029 + 19036176-19036481,19036602-19036733,19036814-19036933,
            19037763-19037837,19038282-19038392,19038528-19038635,
            19038865-19038933,19038934-19039004,19039095-19039147,
            19039223-19039326,19039424-19039696
          Length = 473

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +3

Query: 996  GGRXPXXXSXLTENSAPTPPGXXTAXFXXXLXPAXSPXPPPP 1121
            G R P   S  T+ S P P     A       P+ S  PPPP
Sbjct: 14   GQREPHASSSSTDASIPAPTSAAAAAADVPPPPSSSSSPPPP 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,939,393
Number of Sequences: 37544
Number of extensions: 401699
Number of successful extensions: 967
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)