BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G01
(1147 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 31 0.063
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 29 0.25
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 1.3
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 1.3
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 1.3
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 25 3.1
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 25 4.2
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 7.3
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 31.1 bits (67), Expect = 0.063
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 745 PXXXGRGGGRXXXKADSERSXAGGXGXGXWGGG 647
P G GGGR D +R GG G GGG
Sbjct: 224 PGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +2
Query: 398 GGXXXPPXPXGGGGXXXXSTPXXKKXKXKXXLRGGGAGDHXQQ 526
GG P P GGGG + + + GG G Q
Sbjct: 216 GGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQ 258
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 328 GGGGXGGGA 302
GGGG GGGA
Sbjct: 171 GGGGGGGGA 179
Score = 22.2 bits (45), Expect(2) = 3.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 328 GGGGXGGGA 302
GGGG GGGA
Sbjct: 203 GGGGSGGGA 211
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 346 GXCXAXGGGGXGGG 305
G + GGGG GGG
Sbjct: 163 GRSSSGGGGGGGGG 176
Score = 21.0 bits (42), Expect(2) = 3.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 346 GXCXAXGGGGXGGG 305
G + GGGG GGG
Sbjct: 162 GGRSSSGGGGGGGG 175
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 29.1 bits (62), Expect = 0.25
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 733 GRGGGRXXXKADSERSXAGGXGXGXWG 653
GRGGGR + R GG G G +G
Sbjct: 74 GRGGGRGRGRGRGGRDGGGGFGGGGYG 100
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 328 GGGGXGGGAXXXXXXGP 278
GGGG GGG GP
Sbjct: 298 GGGGGGGGGGGGGSAGP 314
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 346 GXCXAXGGGGXGGG 305
G GGGG GGG
Sbjct: 293 GGVGGGGGGGGGGG 306
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 328 GGGGXGGGAXXXXXXGP 278
GGGG GGG GP
Sbjct: 298 GGGGGGGGGGGGGSAGP 314
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 346 GXCXAXGGGGXGGG 305
G GGGG GGG
Sbjct: 293 GGVGGGGGGGGGGG 306
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 328 GGGGXGGGAXXXXXXGP 278
GGGG GGG GP
Sbjct: 250 GGGGGGGGGGGGGSAGP 266
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 346 GXCXAXGGGGXGGG 305
G GGGG GGG
Sbjct: 245 GGVGGGGGGGGGGG 258
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.4 bits (53), Expect = 3.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 328 GGGGXGGGAXXXXXXGPRXXXAXXXRXWGG 239
GGGG GG P R WGG
Sbjct: 394 GGGGGGGDGGSDGKKPPNNPLEKTNRLWGG 423
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.0 bits (52), Expect = 4.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 303 APPPXPPPPXAXQXP 347
+PPP PPPP + P
Sbjct: 782 SPPPPPPPPPSSLSP 796
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.2 bits (50), Expect = 7.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 306 PPPXPPPPXAXQXPNKQL 359
PPP PPPP P L
Sbjct: 581 PPPAPPPPPPMGPPPSPL 598
Score = 23.8 bits (49), Expect = 9.6
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 654 PHXPXPXPPAXDRSLSAXXXLLPPP 728
P P P PP L+ LPPP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPP 551
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.142 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,083
Number of Sequences: 2352
Number of extensions: 9484
Number of successful extensions: 69
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 128755305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -