Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_G01
(1147 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.071
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.071
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.071
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.094
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 35 0.12
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 0.18
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.38
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 33 0.50
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 33 0.50
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.50
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.50
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 25 0.84
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.87
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.87
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.87
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.87
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.87
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.7
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 27 3.2
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 26 4.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.7
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 29 6.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 8.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 8.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 8.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 8.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.071
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 183 PSGXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPP 329
P PPP L GG PPP L + P PPP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP GG PPPP
Sbjct: 758 PPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +3
Query: 189 GXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXX-----APPPXPPPPXAXQXP 347
G PPP L GG PPP L P PPP PPPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 505 PPPPEGXFXFXFFXXGCGXXXXPPPPXXXXGXXXPPP 395
PPPP G GC PPPP G PPP
Sbjct: 761 PPPPPG---------GCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 773 PPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPP GG PPPP
Sbjct: 774 PPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.071
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 183 PSGXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPP 329
P PPP L GG PPP L + P PPP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP GG PPPP
Sbjct: 758 PPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +3
Query: 189 GXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXX-----APPPXPPPPXAXQXP 347
G PPP L GG PPP L P PPP PPPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 505 PPPPEGXFXFXFFXXGCGXXXXPPPPXXXXGXXXPPP 395
PPPP G GC PPPP G PPP
Sbjct: 761 PPPPPG---------GCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 773 PPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPP GG PPPP
Sbjct: 774 PPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.071
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 183 PSGXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPP 329
P PPP L GG PPP L + P PPP PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP GG PPPP
Sbjct: 341 PPPPPPPPGGCPPPP 355
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +3
Query: 189 GXPPPHXLKX--GGQXXAPPPXLLXXXAXXXRGPXXXXXX-----APPPXPPPPXAXQXP 347
G PPP L GG PPP L P PPP PPPP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 505 PPPPEGXFXFXFFXXGCGXXXXPPPPXXXXGXXXPPP 395
PPPP G GC PPPP G PPP
Sbjct: 344 PPPPPG---------GCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 356 PPPPPGGFKGGPPPP 370
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 342 PPPPPPPGGCPPPPP 356
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPP GG PPPP
Sbjct: 357 PPPPGGFKGGPPPPP 371
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.094
Identities = 29/93 (31%), Positives = 29/93 (31%)
Frame = -1
Query: 460 GCGXXXXPPPPXXXXGXXXPPPRGXGXX*XXXXWSCLLGXCXAXGGGGXGGGAXXXXXXG 281
GCG PPPP PP G G C G C GGGG GGG G
Sbjct: 104 GCGGGCAPPPP--------PPACGGGCG--GGGGGCG-GGCGGGGGGGCGGGGGGGCGGG 152
Query: 280 PRXXXAXXXRXWGGGAXXCPPXXSXXGGGXPEG 182
GGG GGG G
Sbjct: 153 GGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
Score = 33.9 bits (74), Expect = 0.22
Identities = 28/88 (31%), Positives = 29/88 (32%)
Frame = -1
Query: 460 GCGXXXXPPPPXXXXGXXXPPPRGXGXX*XXXXWSCLLGXCXAXGGGGXGGGAXXXXXXG 281
GCG PPPP PP G G C G GGGG GGG G
Sbjct: 47 GCGGGCAPPPP--------PPACGGGCG--GGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Query: 280 PRXXXAXXXRXWGGGAXXCPPXXSXXGG 197
GGG PP + GG
Sbjct: 97 ---GGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 328 GGGGXGGGAXXXXXXGPRXXXAXXXRXWGGGAXXCPPXXSXXGGG 194
GGGG GGG P GGG C GGG
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXPNK 353
P+ PPP G PPP L G PPP PPPP + K
Sbjct: 536 PTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMFNGK 592
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 306 PPPXPPPPXAXQXPNK 353
PPP PPPP A + P +
Sbjct: 142 PPPPPPPPPAPEAPTQ 157
Score = 25.0 bits (52), Expect(2) = 0.18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 303 APPPXPPPP 329
APPP PPPP
Sbjct: 140 APPPPPPPP 148
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.38
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPP 326
P G PPP + GG PPP ++ P APPP PPP
Sbjct: 80 PGGIPPPPPMFAGG--IPPPPPMMGGIP-----PPPPMFGAPPPPPPP 120
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP GG PPPP
Sbjct: 84 PPPPPMFAGGIPPPP 98
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 437 PPPPXXXGGXPPPP 396
PPPP GG PPPP
Sbjct: 95 PPPPPMMGGIPPPP 108
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 32.7 bits (71), Expect = 0.50
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +3
Query: 171 IFXXPSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXP 347
IF P G PP H G Q PPP A P AP P P P + Q P
Sbjct: 1185 IFGAP-GAPPQHQGSFGAQFGVPPPQNSAPGAQFGAKP-EASSHAPTPPPQPHPSYQAP 1241
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 32.7 bits (71), Expect = 0.50
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +3
Query: 171 IFXXPSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXP 347
IF P G PP H G Q PPP A P AP P P P + Q P
Sbjct: 1205 IFGAP-GAPPQHQGSFGAQFGVPPPQNSAPGAQFGAKP-EASSHAPTPPPQPHPSYQAP 1261
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.50
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +3
Query: 189 GXPPPHXLKXGGQXXAPPPX--LLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXP 347
G PPPH G + PPP G PPP PPPP P
Sbjct: 1558 GLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP GG PPPP
Sbjct: 579 PPPPPPMLGGPPPPP 593
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 580 PPPPPMLGGPPPPPP 594
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 578 PPPPPPPMLGGPPPP 592
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.4 bits (53), Expect(2) = 0.84
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 306 PPPXPPPPXAXQXP 347
PPP PPPP + P
Sbjct: 85 PPPPPPPPPTLKAP 98
Score = 25.0 bits (52), Expect(2) = 0.84
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 303 APPPXPPPP 329
APPP PPPP
Sbjct: 83 APPPPPPPP 91
Score = 24.2 bits (50), Expect(2) = 8.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 306 PPPXPPPPXAXQXP 347
PPP PPPP P
Sbjct: 86 PPPPPPPPTLKAPP 99
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 276 RGPXXXXXXAPPPXPPPP 329
+ P A PP PPPP
Sbjct: 56 KDPNDNIVKATPPPPPPP 73
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -1
Query: 346 GXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGGAXXCPPXXSXXGGGXPEG 182
G C GGG GGG P GG C P + GGG G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -1
Query: 346 GXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGGAXXCPPXXSXXGGG 194
G C GGGG GGG G GGG C S GGG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGG--CGGGGSSGGGG 201
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -1
Query: 415 GXXXPPPRGXGXX*XXXXWSCLLGXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGG 236
G PPP G C G GGGG GGG G GGG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG--GGCGGGGGGCGGG 127
Query: 235 AXXCPPXXSXXGGGXPEG 182
C GG G
Sbjct: 128 GGGCGGGGGGGCGGGSSG 145
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -1
Query: 346 GXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGGAXXCPPXXSXXGGGXPEG 182
G C GGG GGG P GG C P + GGG G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -1
Query: 346 GXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGGAXXCPPXXSXXGGG 194
G C GGGG GGG G GGG C S GGG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGG--CGGGGSSGGGG 201
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -1
Query: 415 GXXXPPPRGXGXX*XXXXWSCLLGXCXAXGGGGXGGGAXXXXXXGPRXXXAXXXRXWGGG 236
G PPP G C G GGGG GGG G GGG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG--GGCGGGGGGCGGG 127
Query: 235 AXXCPPXXSXXGGGXPEG 182
C GG G
Sbjct: 128 GGGCGGGGGGGCGGGSSG 145
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.87
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 186 SGXPPPHXLKXGG---QXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXPNKQ 356
SG PPP + +PPP G A P PPPP P
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 357 LXXXFXXXXPXPRGGGXXXP 416
L P P G G P
Sbjct: 312 LPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.87
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 186 SGXPPPHXLKXGG---QXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXPNKQ 356
SG PPP + +PPP G A P PPPP P
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 357 LXXXFXXXXPXPRGGGXXXP 416
L P P G G P
Sbjct: 333 LPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.87
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 186 SGXPPPHXLKXGG---QXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPPPPXAXQXPNKQ 356
SG PPP + +PPP G A P PPPP P
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 357 LXXXFXXXXPXPRGGGXXXP 416
L P P G G P
Sbjct: 318 LPPPQAGGSPPPAGTGSPPP 337
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGPXXXXXXAPPPXPP--PPXAXQXP 347
P PPP + GG PPP R P PP P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLLXXXAXXXRGP--XXXXXXAPPPXPPPPXAXQXPNKQ 356
P G PPP G PPP R P PPP PPP Q Q
Sbjct: 37 PWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEPQQDQPQ 96
Query: 357 L 359
+
Sbjct: 97 V 97
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 397 GGGGXPPXSXGGGGG 441
GGGG PP GGGGG
Sbjct: 622 GGGGGPPRGPGGGGG 636
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 397 GGGGXPPXSXGGGGG 441
GGGG PP GGGGG
Sbjct: 622 GGGGGPPRGPGGGGG 636
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 127 PPPPPKGTGSPPPPP 141
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 158 PPPPPKGTGSPPPPP 172
Score = 30.3 bits (65), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 251 PPPPPKGTGSPPPPP 265
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 470 FLXGVWKXXXPPPPPXXXGGXPPPP 396
F G PPPPP G PPPP
Sbjct: 23 FSVGETASRRPPPPPKGTGTPPPPP 47
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 64 PPPPPKGTGTPPPPP 78
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 96 PPPPPKGTGTPPPPP 110
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPPPP G PPPP
Sbjct: 189 PPPPPKGTGTPPPPP 203
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 505 PPPPEGXFXFXFFXXGCGXXXXPPPPXXXXGXXXPPPRG 389
PPPP G G PPPP G PPP G
Sbjct: 75 PPPPTGEPQDLSAEEG-NASRRPPPPPKGTGTPPPPPTG 112
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 26.6 bits (56), Expect(2) = 3.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 306 PPPXPPPPXAXQXPNK 353
PPP PPPP + P+K
Sbjct: 222 PPPPPPPPISLIAPSK 237
Score = 21.8 bits (44), Expect(2) = 3.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 303 APPPXPPPP 329
AP P PPPP
Sbjct: 219 APTPPPPPP 227
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 25.8 bits (54), Expect(2) = 4.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 303 APPPXPPPPXAXQ 341
APPP PPPP Q
Sbjct: 345 APPPPPPPPHPQQ 357
Score = 22.2 bits (45), Expect(2) = 4.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 237 PPPXLLXXXAXXXRGPXXXXXXAPPPXPPP 326
PPP A P PPP PPP
Sbjct: 325 PPPYSYYPVAPAA-APQVYHYAPPPPPPPP 353
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 440 PPPPPXXXGGXPPPP 396
PPP P GG PPPP
Sbjct: 42 PPPAPACGGGAPPPP 56
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 733 GRGGGRXXXKADSERSXAGGXGXGXWGGG 647
GRGGG + R GG G G GGG
Sbjct: 26 GRGGGGGGRGSSGARGGVGGRGGGGRGGG 54
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 674 PPRXRPLAVGFXXXPXPPPPXXXGG 748
PP P G+ P PPPP GG
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGG 65
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -1
Query: 733 GRGGGRXXXKADSERSXAGGXGXG--XWGG 650
GRGGG + S + AGG G G WGG
Sbjct: 66 GRGGGSGGGRGGSGGAGAGGSGSGSGGWGG 95
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLL---XXXAXXXRGPXXXXXXAPPPXPPPP 329
P G PPPH PPP L + P A P PPPP
Sbjct: 103 PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 154
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLL---XXXAXXXRGPXXXXXXAPPPXPPPP 329
P G PPPH PPP L + P A P PPPP
Sbjct: 126 PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 177
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 183 PSGXPPPHXLKXGGQXXAPPPXLL---XXXAXXXRGPXXXXXXAPPPXPPPP 329
P G PPPH PPP L + P A P PPPP
Sbjct: 376 PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.142 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,484,203
Number of Sequences: 27780
Number of extensions: 276810
Number of successful extensions: 2384
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3109468484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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