Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_F24
(934 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 45 2e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.044
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.31
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.94
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 4.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 8.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/63 (38%), Positives = 26/63 (41%)
Frame = +3
Query: 717 QTPLSXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPP 896
Q L P PP + P P P P P PP + PPP P P PPPP
Sbjct: 725 QKLLLKSPPPPPPAVIV---PTPAPA-PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Query: 897 PPP 905
PPP
Sbjct: 781 PPP 783
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 798 PXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPPXXXXXSSPP 932
P P PP + P P P P PPPPPPP + PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 557 PPXPPXXXXPPXXXXRXGXXPP-PFXGGXXXPPPQXKKXXAGXGXPPPP 700
PP PP P PP P GG PPP AG PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.033
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +3
Query: 804 PXPPXXXLFXXPPPXG---PXPXPXLXXXXPPPPPPPXXXXXSSPP 932
P PP + P P P P P + PPPPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 748 PPXLXFXXXPPSXXPXTXXPPXPFXXFSPXPPPRGPXXXXXXXPXXHHPPPPXGXXG 918
PP P+ P PP P P PPP P P PPP G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMG-GPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 689 PPPPSXGXXXNPXXXXXXXAPPXXXFXAXPPPXXPXPXXXPXXSXPFXLPPP 844
PPPP PP PPP P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 556 PPXPPXXXXXPXXXXXRGXXPPXLXGGXXXAPPPXKKXLGGXWXPPPP 699
PP PP P PP PPP + G PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 689 PPPPSXGXXXNPXXXXXXXAPPXXXFXAXPPPXXPXPXXXPXXSXPFXLPPPXGAXA 859
PPPP P PP PPP P P P PPP A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP--PPPPGVAGAGPPPPPPPPPAVSA 787
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +1
Query: 493 IXNQ*NILCIXXPPPXXXXXXPPXPPXXXXXPXXXXXRGXXPPXLXGGXXXAPPPXKKXL 672
+ Q +L PPP P P P G PP PPP
Sbjct: 721 VEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-------PPPPGVAGA 773
Query: 673 GGXWXPPPP 699
G PPPP
Sbjct: 774 GPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 30/125 (24%), Positives = 32/125 (25%)
Frame = +1
Query: 529 PPPXXXXXXPPXPPXXXXXPXXXXXRGXXPPXLXGGXXXAPPPXKKXLGGXWXPPPPLXX 708
P P PP P P P + PP K G PPP
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTS---TPPVPKSSSGAPSAPPPVPAP 1069
Query: 709 GXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXPPXPFXXFSPXPPPRGPXXXXXXXPXXH 888
P P PP PP P PP P + P P P
Sbjct: 1070 SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
Query: 889 HPPPP 903
PP P
Sbjct: 1130 APPVP 1134
Score = 37.1 bits (82), Expect = 0.004
Identities = 33/135 (24%), Positives = 37/135 (27%)
Frame = +1
Query: 529 PPPXXXXXXPPXPPXXXXXPXXXXXRGXXPPXLXGGXXXAPPPXKKXLGGXWXPPPPLXX 708
PP PP P P PP APP K + PP P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPV--PAPSGAPPVPKPSVAA---PPVPVPS 1137
Query: 709 GXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXPPXPFXXFSPXPPPRGPXXXXXXXPXXH 888
G P PP PP P PP P P P+ P
Sbjct: 1138 GAP-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 889 HPPPPXGXXGXLXLP 933
PP P G +P
Sbjct: 1197 APPVPKPSVGVPPVP 1211
Score = 33.5 bits (73), Expect = 0.044
Identities = 30/125 (24%), Positives = 32/125 (25%)
Frame = +1
Query: 529 PPPXXXXXXPPXPPXXXXXPXXXXXRGXXPPXLXGGXXXAPPPXKKXLGGXWXPPPPLXX 708
P P PP P P P G APP K + PP P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG---APPVPKPSVAA---PPVPAPS 1175
Query: 709 GXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXPPXPFXXFSPXPPPRGPXXXXXXXPXXH 888
P PP PP P PP P +P P P
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 889 HPPPP 903
PP P
Sbjct: 1236 APPVP 1240
Score = 33.5 bits (73), Expect = 0.044
Identities = 27/104 (25%), Positives = 27/104 (25%)
Frame = +2
Query: 530 PPXXPXXXXPPXPPXXXXPPXXXXRXGXXPPPFXGGXXXPPPQXKKXXAGXGXPPPPSXG 709
P P PP P PP P P P P K AG PPPS
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP---KPAAGVPPVPPPSEA 1197
Query: 710 XXXNPXXXXXXXAPPXXXFXAXPPPXXPXPXXXPXXSXPFXLPP 841
P PP PP P P PP
Sbjct: 1198 P---PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 33.1 bits (72), Expect = 0.058
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 729 SXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPPX 908
S P P S P P P P + PPP P P PP PPP
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 909 XXXXSSP 929
+P
Sbjct: 1216 APPVPTP 1222
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 747 PPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPPXXXXXSS 926
PP PP+P P P P PP P P + P PP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 927 PP 932
PP
Sbjct: 1092 PP 1093
Score = 31.1 bits (67), Expect = 0.23
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = +3
Query: 723 PLSXXPXXPPXSXFFXXPPLPXPXXPXPX-PPXXXLFXXPPPX-GPXPXPXLXXXXPPPP 896
P + P PP S PP+P P P PP P P G P P PP P
Sbjct: 1184 PAAGVPPVPPPSE---APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Query: 897 PPPXXXXXSSPP 932
P S P
Sbjct: 1241 APSSEAPSVSTP 1252
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 729 SXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPP 902
S P P S P P P P P P G P P PP PPP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +3
Query: 723 PLSXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPP-PXGPXPXPXLXXXXPPPPP 899
PL+ P P S PP+P P P P P P P P P PP
Sbjct: 1007 PLARVPPVPKLSS--KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Query: 900 P 902
P
Sbjct: 1065 P 1065
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 720 TPLSXXPXXPPXSXFFXXPPLPXPXXPXPX-PPXXXLFXXPPPXGPXPXPXLXXXXPPPP 896
+P S P P S P P P PP L PP P P P
Sbjct: 981 SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPV-PLPSADAPPIPVPST 1039
Query: 897 PPPXXXXXSSPP 932
PP S+PP
Sbjct: 1040 APPVPIPTSTPP 1051
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/70 (25%), Positives = 21/70 (30%)
Frame = +3
Query: 723 PLSXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPP 902
PLS P + PP+P P P P P P PP P
Sbjct: 995 PLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPK 1054
Query: 903 PXXXXXSSPP 932
S+PP
Sbjct: 1055 SSSGAPSAPP 1064
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 747 PPXSXFFXXPPLPXPXXPXPXPPXXXLFXXP---PPXGPXPXPXLXXXXPPPPPPPXXXX 917
PP PP+P P P P P P G P P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVP 1208
Query: 918 XSSPP 932
PP
Sbjct: 1209 PVPPP 1213
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 16/60 (26%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PLSXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPP 902
P P PP S PP+P P P P P P P + P P
Sbjct: 1203 PSVGVPPVPPPST---APPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 21.8 bits (44), Expect(2) = 3.5
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +3
Query: 528 PPPXXXXXXXPPPPXXXXXPPXXXXAXGRAPXP 626
PP PP P PP + G P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = +1
Query: 649 PPPXKKXLGGXWXPPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXPPXPFXXF 828
PPP G PPPP+ + P P P P PP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH- 266
Query: 829 SPXPPPRGPXXXXXXXPXXHHPPPP 903
P P P H PPPP
Sbjct: 267 --EPGEHMPPPPMHHEPGEHMPPPP 289
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/96 (26%), Positives = 27/96 (28%)
Frame = +1
Query: 616 PPXLXGGXXXAPPPXKKXLGGXWXPPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPX 795
PP PPP G PPPP+ + P P P P
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Query: 796 TXXPPXPFXXFSPXPPPRGPXXXXXXXPXXHHPPPP 903
PP P P P P H PPPP
Sbjct: 270 EHMPPPPMHH---EPGEHMPPPPMHHEPGEHMPPPP 302
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/96 (26%), Positives = 27/96 (28%)
Frame = +1
Query: 616 PPXLXGGXXXAPPPXKKXLGGXWXPPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPX 795
PP PPP G PPPP+ + P P P P
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Query: 796 TXXPPXPFXXFSPXPPPRGPXXXXXXXPXXHHPPPP 903
PP P P P P H PPPP
Sbjct: 309 EHMPPPPMHH---EPGEHMPPPPMHHEPGEHMPPPP 341
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/95 (24%), Positives = 25/95 (26%)
Frame = +1
Query: 616 PPXLXGGXXXAPPPXKKXLGGXWXPPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPX 795
PP PPP G PPPP+ + P P P P
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Query: 796 TXXPPXPFXXFSPXPPPRGPXXXXXXXPXXHHPPP 900
PP PF GP HH P
Sbjct: 335 EHMPPPPFKHHE-LEEHEGPEHHRGPEDKEHHKGP 368
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +1
Query: 676 GXWXPPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXPPXPFXXFSPXPPPRGP 855
G PPPP+ + P P P P PP P P P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH---EPGEHMP 260
Query: 856 XXXXXXXPXXHHPPPP 903
P H PPPP
Sbjct: 261 PPPMHHEPGEHMPPPP 276
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +3
Query: 720 TPLSXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPP 899
TP S P PP P LP P P P P G P L P PPP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 900 PP 905
P
Sbjct: 479 AP 480
Score = 32.3 bits (70), Expect = 0.10
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +3
Query: 729 SXXPXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPPX 908
S P PP S P P PP PP G PPPPPPP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSS---NSSLPPPPPPPR 344
Query: 909 XXXXSSPP 932
S P
Sbjct: 345 SNAAGSIP 352
Score = 31.9 bits (69), Expect = 0.13
Identities = 37/130 (28%), Positives = 39/130 (30%), Gaps = 15/130 (11%)
Frame = +2
Query: 560 PXPPXXXXPPXXXXRXGXXPPPFXGGXXXPPPQXKKXXAGXGXPPPPSXGXXXNPXXXXX 739
P PP PP G P P G PPP + + G PPP
Sbjct: 337 PPPP----PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS-TGRQPPPLSSSRAVSNPPAP 391
Query: 740 XXAPPXXXFXAXPP---------PXXPXPXXXPXXSXPFXLPP------PXGAXAXXXXX 874
A P A PP P P P P S P LPP P GA A
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 875 XXXXTTPPPP 904
PP P
Sbjct: 451 PSAPIAPPLP 460
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 837 PPPXGPXPXPXLXXXXPPPPPPPXXXXXSSPP 932
P P P L PPP PPP SSPP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 30.3 bits (65), Expect = 0.41
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 7/72 (9%)
Frame = +3
Query: 738 PXXPPXSXFFXXPPL--PXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXX-----PPPP 896
P PP + PP P P P P PP P PPPP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 897 PPPXXXXXSSPP 932
PPP PP
Sbjct: 315 PPPSRRNRGKPP 326
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 774 PPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPP 905
PP+P P P PP P P P P PP PP
Sbjct: 230 PPIP-PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 774 PPLPXPXXPXPXPPXXXLFXXPP--PXGPXPXPXLXXXXPPPPPPPXXXXXSSP 929
PP+P P P P PP P G P L P PP P + P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 774 PPLPXPXXPXPXPPXXXLFXXPPPXGPXP------XPXLXXXXPPPPPPP 905
P L P P PP PP P P P + PP PPP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 26.6 bits (56), Expect = 5.0
Identities = 25/109 (22%), Positives = 26/109 (23%), Gaps = 2/109 (1%)
Frame = +2
Query: 530 PPXXPXXXXPPXPPXXXXPPXXXXRXGXXP--PPFXGGXXXPPPQXKKXXAGXGXPPPPS 703
PP P P PP P PP P PP P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 704 XGXXXNPXXXXXXXAPPXXXFXAXPPPXXPXPXXXPXXSXPFXLPPPXG 850
P APP PPP P P + LP G
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPP-APAPAPAAPVASIAELPQQDG 499
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.044
Identities = 31/113 (27%), Positives = 32/113 (28%), Gaps = 2/113 (1%)
Frame = +2
Query: 518 AXXXPPXXPXXXXPPXPPXXXXPPXXXXRXGXXPPPFXGGXXXPPPQXKKXXAGXGXPPP 697
A PP P PP P PP PPP PP K PPP
Sbjct: 120 ASAAPPSAPA---PPTPQSELRPPTSAPPRPSIPPPSPAS--APPIPSKAPPIPSSLPPP 174
Query: 698 --PSXGXXXNPXXXXXXXAPPXXXFXAXPPPXXPXPXXXPXXSXPFXLPPPXG 850
P+ P A P PPP P S P PP G
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVAN-TSSRPSSFAPPAG 226
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 738 PXXPPXSXFFXXPPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPPXXXX 917
P PP S PP+P P P P P P L PP PP
Sbjct: 147 PSIPPPSPA-SAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Query: 918 XSSPP 932
S P
Sbjct: 206 LSQAP 210
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 789 PXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPP 902
P P PP + PPP P P P PPPP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 789 PXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPP--PPPXXXXXSSPP 932
P P PP PP P PPPP PP S+PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 688 PPPPLXXGXXKPXXPXXXXGPPXLXFXXXPPSXXPXTXXP 807
PPPP P P GPP P S P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -1
Query: 901 GGGGGGXXXXXXGXGXGPXG-GGXXKRXXXGGXGXGXXGXGRGG 773
GGG GG G G GP G GG G G G G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.1 bits (62), Expect = 0.94
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 904 GGGGGGGXXXXXXGXGXGPXGGGXXKRXXXGGXGXGXXGXGRGGXXKXXXXGGXXG 737
GGG GG G G GG GG G G G G GG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 29.1 bits (62), Expect = 0.94
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -1
Query: 934 GGGEXXXXXXGGGGGGGXXXXXXGXGXGPXGGGXXK-RXXXGGXGXGXXGXGRGGXXKXX 758
GG GG GG G G G G GGG GG G G G G G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHG-GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
Query: 757 XXGGXXG 737
GG G
Sbjct: 257 GPGGFGG 263
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -1
Query: 934 GGGEXXXXXXGGGGGGGXXXXXXGXGXGPXGGGXXKRXXXGGXGXGXXGXGRGG 773
GGG GG GGG G G G GGG GG G G G G G
Sbjct: 227 GGGPGGFEGGPGGFGGG--PGGFGGGLGGFGGG------PGGFGGGPGGHGGPG 272
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 901 GGGGGGXXXXXXGXGXGPXGGGXXKRXXXGGXGXGXXGXGRGGXXKXXXXGGXXG 737
GGG GG G GP G G GG G G G G GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF--GGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = -3
Query: 932 GRXRXPXXPXGGGGWWXXGXKXXXXXGPRGGGXGEKXXXGXGGXXVXGXXEGGXXKKXRX 753
G P P G GG+ G + G G G G G G G G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 752 GGPXXXXGXXG 720
GGP G G
Sbjct: 256 GGPGGFGGGPG 266
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -1
Query: 931 GGEXXXXXXGGGGGGGXXXXXXGXGXGPXGGGXXKRXXXGGXGXGXXGXGRGGXXKXXXX 752
GG GG GG G G GG R GG G G G +
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 751 GG 746
GG
Sbjct: 69 GG 70
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -1
Query: 934 GGGEXXXXXXGGGGG--GGXXXXXXGXGXGPXGGGXXKRXXXGGXGXGXXGXGRGG 773
GG GG G GG G G G GG R G G G GRGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG-GRGGSSGGRGG 66
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.94
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 840 PPXGPXPXPXLXXXXPPPPPPP 905
PP P P PPPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.94
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 885 PPPPPPPXXXXXSSPP 932
PPPPPPP S PP
Sbjct: 10 PPPPPPPGFEPPSQPP 25
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 840 PPXGPXPXPXLXXXXPP--PPPPP 905
PP P P P PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 837 PPPXGPXPXPXLXXXXPPPPPP 902
PPP P P PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 837 PPPXGPXPXPXLXXXXPPPPPPPXXXXXSSPP 932
P P P P P + PPPPP S PP
Sbjct: 729 PAPPTPAPTPAVKHH-PPPPPVRSSISPSMPP 759
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 934 GGGEXXXXXXGGGGGGGXXXXXXGXGXGPXGG-GXXKRXXXGGXGXGXXGXGRGG 773
GG GG GG G G G GG G R GG G G RGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSR---GGSRGGFRGGSRGG 189
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 840 PPXGPXPXPXLXXXXPPPPPPP 905
PP P L PPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPP 194
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 774 PPLPXPXXPXPXPPXXXLFXXPPPXGPXPXPXLXXXXPPPPPPP 905
P + P PP F P P PPPPPPP
Sbjct: 156 PTVSAPNSMVSPPPS---FQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 24.2 bits (50), Expect(2) = 4.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 837 PPPXGPXPXPXLXXXXPPPPPPP 905
PP P L PPPPPPP
Sbjct: 224 PPTYTPKQADPLPA--PPPPPPP 244
Score = 20.6 bits (41), Expect(2) = 4.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +3
Query: 726 LSXXPXXPPXSXFFXXPPLPXPXXPXPXPP 815
+S P P S LP P P PP
Sbjct: 165 VSPPPSFQPPSAAAPATSLPSDYNPPPPPP 194
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 885 PPPPPPPXXXXXSSP 929
PPPPPPP SP
Sbjct: 370 PPPPPPPPELLNHSP 384
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/47 (29%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Frame = +3
Query: 777 PLPXPXXPXPXPPXXXLFXXPPPXG----PXPXPXLXXXXPPPPPPP 905
P P P P P F P + PPPPPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPP 951
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,771,663
Number of Sequences: 5004
Number of extensions: 52767
Number of successful extensions: 434
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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