Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_F23
(933 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 1e-06
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 53 9e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 48 3e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.017
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.017
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.090
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.12
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
UniRef50_UPI0000EBDD47 Cluster: PREDICTED: similar to Na+,K+ ATP... 33 7.9
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 77.4 bits (182), Expect = 5e-13
Identities = 50/99 (50%), Positives = 55/99 (55%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITXERTCEQKASKRP 493
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 494 XXVXTPXCWRFSIXSXPLTSITKIXAQVRGGXTRQDY*D 610
P RFSI S PLTSI K AQ+ GG TRQDY D
Sbjct: 77 IR---PRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKD 112
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 490 PFAGLLLTCSFXXYPLILWITVLPPLSELIPLAAAERP 377
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/55 (56%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGI 451
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGM 320
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2
Query: 521 RFSIXSXPLTSITKIXAQVRGGXTRQDY*DT 613
RFSI S PLTSITKI AQVRGG TRQDY DT
Sbjct: 15 RFSIGSAPLTSITKIDAQVRGGETRQDYKDT 45
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 48.4 bits (110), Expect = 3e-04
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +2
Query: 500 VXTPXCWRFSIXSXPLTSITKIXAQVRGGXTRQDY*DT 613
V P RFSI S PLTSITK AQ+ GG TRQDY DT
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDT 81
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 42.3 bits (95), Expect = 0.017
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 216 INKLTTTIAFILCFRFRAEVWEVFSALMNRPTRGERRFAYW 338
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.017
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 92 DPXMIRYIDEFGQTTTRMQ 148
DP MIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.090
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 409 HSKAVIRLSTESGDNXXKNM 468
HSKAVIRLSTESGDN KNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.9
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI0000EBDD47 Cluster: PREDICTED: similar to Na+,K+ ATPase
isoform 1; n=1; Bos taurus|Rep: PREDICTED: similar to
Na+,K+ ATPase isoform 1 - Bos taurus
Length = 1045
Score = 33.5 bits (73), Expect = 7.9
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -3
Query: 541 GGAYGKTPAXRRXYXXWPFAGLLLTCSFXXYPLILWITVLPPLSELIPLAA 389
G A P RR WP+A LT W T LPPLS + AA
Sbjct: 777 GMAXTTPPPXRRPTSGWPWASPALTSPNRQLTXFFWTTTLPPLSRVWRRAA 827
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 33.5 bits (73), Expect = 7.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 389 CGERYQLTQRR*YG--YPQNQGITXERTCEQKASKRPXXVXTPXCWRFSIXSXPLTSITK 562
C R Q R G +P+N I +R + + + P F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 563 IXAQVRGGXTRQDY 604
I Q + T+ +Y
Sbjct: 82 IYPQFKNTQTQHNY 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,944,849
Number of Sequences: 1657284
Number of extensions: 9142651
Number of successful extensions: 19263
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19255
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85324527343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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