Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F19
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0469 + 14439472-14440905                                         29   4.4  
03_01_0259 - 1996427-1998772                                           29   4.4  
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375...    29   5.8  
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924...    28   7.7  

>05_03_0469 + 14439472-14440905
          Length = 477

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 553 VTPKTKPARKXPGS--LPPCWKTTEFTSRSCPP 461
           +T  T+ AR  PG+  +PP W+    T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219


>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 605 HHALKLIDQQNHNKIAFGDSK 543
           HHALKLI + +  +I  GDSK
Sbjct: 745 HHALKLISRYSGRRIVVGDSK 765


>03_05_0175 +
           21513767-21513903,21534361-21535385,21537375-21537547,
           21537849-21538679
          Length = 721

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/75 (21%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = -2

Query: 639 EQTVKVHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESXLEVYP--RVGKQQSLLQDHV 466
           +Q +K   +KG  + + ++  + Q N  +  ++Q QQ+   ++ P  ++GK+Q+  ++  
Sbjct: 538 KQQIKPQGKKGQQQTKPEQKKQQQLNTNKPQEQQQQQQQKQQIKPQEKMGKEQTKPEEQQ 597

Query: 465 HRGQT-VPEAR*HER 424
            + +T  P+ + H++
Sbjct: 598 QQQKTNRPQEQQHKK 612


>01_05_0346 +
           21191542-21191783,21191988-21192072,21192159-21192422,
           21192518-21192820,21193695-21193799,21193916-21194020,
           21194613-21194712,21195614-21195933,21196183-21196359,
           21196432-21196560,21196592-21196636,21196851-21197078
          Length = 700

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 563 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 429
           I F D K+K  K    K    +EN+ + F +M+  D QYL  +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,064,793
Number of Sequences: 37544
Number of extensions: 365846
Number of successful extensions: 866
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)