BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_F18
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R... 65 2e-09
UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2; Obtectom... 61 4e-08
UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;... 50 6e-05
UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep: F... 41 0.047
UniRef50_Q76H86 Cluster: Hypothecial protein; n=1; Mycoreovirus ... 37 0.77
UniRef50_A1BQ67 Cluster: Acyl carrier protein; n=1; Brugia malay... 36 1.4
UniRef50_Q1FHJ3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A2E353 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A0CJY8 Cluster: Chromosome undetermined scaffold_2, who... 34 5.5
UniRef50_A0CNK8 Cluster: Chromosome undetermined scaffold_22, wh... 33 7.2
UniRef50_A1ZQW8 Cluster: Tetratricopeptide repeat domain protein... 33 9.5
>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
Fibrohexamerin precursor - Bombyx mori (Silk moth)
Length = 220
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/121 (31%), Positives = 59/121 (48%)
Frame = +2
Query: 164 IKRPCPNFDLNCIREYFSRNSQCQLVRGPVPDPLPLNYYRVYIPNSNLTVEYHDVKTRGF 343
I RPC D CI ++ + NS+C RG +P + ++ IP N T H++ TR
Sbjct: 23 IYRPCYLDDYKCISDHLAANSKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNH 82
Query: 344 DTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVDYGTLTF 523
D ++ EFY N +T K VL + L S +T+ ++ KE +V S + Y +
Sbjct: 83 DQCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQH-MSFKEDVVLSFYINGSYPLIRL 141
Query: 524 T 526
T
Sbjct: 142 T 142
>UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2;
Obtectomera|Rep: Fibrohexamerin precursor - Galleria
mellonella (Wax moth)
Length = 218
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 161 NIKRPCPNFDLNCIREYFSRNSQCQL-VRGPVPDPLPLNYYRVYIPNSNLTVEYHDVKTR 337
N+ RPC DL CIR+ S NS C VRG +P + + P N + +++ R
Sbjct: 21 NVVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNNLIIR 80
Query: 338 GFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 454
D ++ EF+ N K + VLA + +L L S +T+ ++
Sbjct: 81 NNDACRVSEFFFNVKADTSVLAVDCPNLDLESDRTLIQH 119
>UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;
Yponomeuta evonymellus|Rep: Low molecular weight silk
protein - Yponomeuta evonymella (Bird-cherry ermine
moth)
Length = 217
Score = 50.4 bits (115), Expect = 6e-05
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 149 MTQKNIKRPCPNFDLNCIREYFSRNSQCQL-VRGPVPDPLPLNYYRVYIPNSNLTVEYHD 325
+ + NI RPC DL CI++ + NS C+ + G P N +R P + + ++
Sbjct: 15 LAEPNIVRPCHLQDLECIQDNLAANSHCKTNIAGTAPTATVSN-FRFECPFFHSSYIENN 73
Query: 326 VKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVD 505
+ R D+ + EF+ N T+K +L+ + L + +T+ ++ R E V +
Sbjct: 74 LIMRNVDSCVVSEFFFNMDTDKALLSIDCLDFGLEADRTVLQH-RSLHEDSVYQYHINST 132
Query: 506 YGTLTFT 526
Y L T
Sbjct: 133 YPILRLT 139
>UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep:
Fibroin P25 - Papilio xuthus
Length = 215
Score = 40.7 bits (91), Expect = 0.047
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +2
Query: 164 IKRPCPNFDLNCIREYFSRNSQCQ-LVRGPVPDPLPLNYYRVYIPNSNLTVEYHDVKTRG 340
+ RPC DL CI + NS+C V G +P + + P N T +++
Sbjct: 18 VVRPCALSDLACIGRNLAANSRCNPNVPGRIPARYTVQSLPFHAPYFNATYIDYNLVVSN 77
Query: 341 FDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 454
+ ++ EF+IN ++ VL+ + +L S + ++
Sbjct: 78 HNRCRVSEFFINLSSKTAVLSLDCPNLDFESNRLTIQH 115
>UniRef50_Q76H86 Cluster: Hypothecial protein; n=1; Mycoreovirus
3|Rep: Hypothecial protein - Mycoreovirus 3
Length = 1086
Score = 36.7 bits (81), Expect = 0.77
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 224 SQCQLVRGPVPDPLPLNYYRVYIPNSNL 307
+ C+L+RGP+ DPLP++ YR Y+ N+
Sbjct: 403 TNCRLLRGPLRDPLPVSMYRRYVTRLNV 430
>UniRef50_A1BQ67 Cluster: Acyl carrier protein; n=1; Brugia
malayi|Rep: Acyl carrier protein - Brugia malayi
(Filarial nematode worm)
Length = 151
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2
Query: 305 LTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 454
LT++ VK GFD++ +E ++ + E +E++S KL +P+ IFKY
Sbjct: 93 LTLDSDFVKDMGFDSLDHVEIIMSLEDEFGFEISELESEKLKTPRDIFKY 142
>UniRef50_Q1FHJ3 Cluster: Putative uncharacterized protein; n=1;
Clostridium phytofermentans ISDg|Rep: Putative
uncharacterized protein - Clostridium phytofermentans
ISDg
Length = 694
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 215 SRNSQCQLVRGPVPDPLPLNYYRVYIPNSNLTVEYHDVKTRGFDTIKIIEFYINSK 382
S+NS+ L + LP YY +Y+P N+ + +H VK GFD + + N K
Sbjct: 437 SKNSE--LPTTETTEALPNEYYNIYLPTYNIEITFH-VK-NGFDYTRTYDVNFNQK 488
>UniRef50_A2E353 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 417
Score = 33.9 bits (74), Expect = 5.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 245 GPVPDPLPLNYYRVYIPNSNLTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAE 409
G PDP+ L Y + SN V Y D KT+ +T+ F N+ T + ++ E
Sbjct: 166 GNAPDPVTLKYSNIESCESNCGVLYFD-KTQASNTVSFCNFIKNTMTSQCLIYVE 219
>UniRef50_A0CJY8 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 719
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 329 KTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKYN 457
K R IKIIE + SK+EKL+LA EV+ +KL + I +++
Sbjct: 457 KDRQTLAIKIIEKFKLSKSEKLMLAHEVEIMKLLNHSCIVRFH 499
>UniRef50_A0CNK8 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_22, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2020
Score = 33.5 bits (73), Expect = 7.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 359 IEFYINSKTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVD 505
IE YIN K K V EV + K S + F+Y+ + R+ L+ D
Sbjct: 1279 IEQYINEKESKFVRCTEVMAFKFTSQRNFFRYSSLIRTKEERTYFLKTD 1327
>UniRef50_A1ZQW8 Cluster: Tetratricopeptide repeat domain protein;
n=1; Microscilla marina ATCC 23134|Rep:
Tetratricopeptide repeat domain protein - Microscilla
marina ATCC 23134
Length = 1441
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 278 YRVYIPNSNLTVEYHDVKTRGFDTIKIIEFYINSKTEKL 394
++ YIP N YHDVK + + I+E + +TEKL
Sbjct: 483 HKDYIPIQNYIATYHDVKEEYKEALAILENNVKVQTEKL 521
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,240,038
Number of Sequences: 1657284
Number of extensions: 14223841
Number of successful extensions: 33842
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33834
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -