Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F16
         (935 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   1.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
 Frame = +1

Query: 571 HPHPXRGXXVXPIN--PGHXPXQXQMNPPXPQTAREPEKTXXXXXXXXQXGPPPP 729
           HP   R     P N  P + P   Q  PP P+  REPE             P PP
Sbjct: 113 HPRLRREPEAEPGNNRPVYIP---QPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
 Frame = +1

Query: 574 PHPX-RGXXVXPINPGHX-PXQX-QMNPPXPQTAREPEKTXXXXXXXXQXGPPPP 729
           PHP  R        PG+  P    Q  PP P+  REPE             P PP
Sbjct: 84  PHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,825
Number of Sequences: 438
Number of extensions: 2455
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)