Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_F13
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 165 4e-41
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 163 1e-40
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 157 7e-39
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 157 1e-38
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 149 3e-36
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 132 2e-31
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 129 2e-30
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 83 3e-16
08_02_1528 + 27666356-27667081 29 5.8
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 7.7
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 7.7
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 165 bits (401), Expect = 4e-41
Identities = 84/138 (60%), Positives = 104/138 (75%), Gaps = 4/138 (2%)
Frame = +2
Query: 311 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 484
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 485 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASN 658
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 659 PXSKVFYLKMKGDYYRYL 712
P SKVFYLKMKGDYYRYL
Sbjct: 340 PESKVFYLKMKGDYYRYL 357
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 163 bits (396), Expect = 1e-40
Identities = 82/138 (59%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
Frame = +2
Query: 311 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 484
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 485 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASN 658
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 659 PXSKVFYLKMKGDYYRYL 712
P SKVFYLKMKGDYYRYL
Sbjct: 122 PESKVFYLKMKGDYYRYL 139
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 157 bits (382), Expect = 7e-39
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 4/133 (3%)
Frame = +2
Query: 326 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 499
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 500 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASNPXSKV 673
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 674 FYLKMKGDYYRYL 712
FYLKMKGDY+RYL
Sbjct: 121 FYLKMKGDYHRYL 133
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 157 bits (380), Expect = 1e-38
Identities = 82/137 (59%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Frame = +2
Query: 314 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 487
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 488 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASNP 661
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 662 XSKVFYLKMKGDYYRYL 712
SKVFYLKMKGDY+RYL
Sbjct: 122 ESKVFYLKMKGDYHRYL 138
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 149 bits (360), Expect = 3e-36
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 7/134 (5%)
Frame = +2
Query: 332 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 496
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 497 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASNPXSK 670
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 671 VFYLKMKGDYYRYL 712
VFYLKMKGDY+RYL
Sbjct: 130 VFYLKMKGDYHRYL 143
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 132 bits (320), Expect = 2e-31
Identities = 61/128 (47%), Positives = 87/128 (67%)
Frame = +2
Query: 329 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 508
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 509 ISSIEQKTEGSERKQQMAKEYRVKVEKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKM 688
+ S+EQK ++ Y+ KVE EL +C +VL ++ H +P A++ + VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 689 KGDYYRYL 712
KGDYYRYL
Sbjct: 123 KGDYYRYL 130
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 129 bits (312), Expect = 2e-30
Identities = 64/99 (64%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Frame = +2
Query: 422 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 595
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 596 XEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYL 712
IC +L LLD HL+P A SKVFYLKMKGDY+RYL
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYL 116
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 83.0 bits (196), Expect = 3e-16
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +2
Query: 389 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 562
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 563 KEYRVKVEKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYL 712
EYR KVE E+ +IC DV+ ++DK KGDYYRYL
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYL 92
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 496
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 497 SWRVISSIEQKTE-GSERKQQMAKEYRV 577
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 296 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 466
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 326 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 487
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 488 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 580
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,811,371
Number of Sequences: 37544
Number of extensions: 424186
Number of successful extensions: 1142
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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