Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F11
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    25   2.4  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    25   3.1  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    25   4.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   7.2  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 108 FILITLICACVNAAKTTYKICVPSQHLKAC 197
           F L    CAC  A    Y +C P++  + C
Sbjct: 15  FTLQNAHCACPYAHPYPYDVCGPNEEFQTC 44


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 108 FILITLICACVNAAKTTYKICVPSQHLKAC 197
           F L    CAC  A    Y +C P++ L  C
Sbjct: 15  FTLQNAHCACPYAHPYPYDLCGPNEELLEC 44


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 108 FILITLICACVNAAKTTYKICVPSQHLKAC 197
           F L    CAC  A    Y +C P++  + C
Sbjct: 15  FTLQNAHCACPYAHPYPYDLCGPNEEFQEC 44


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 669  WDXGGPLTWKAKFLG 625
            WD   P TW A F+G
Sbjct: 2785 WDWSQPGTWNALFIG 2799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,968
Number of Sequences: 2352
Number of extensions: 12501
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)