Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F11
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA...    46   5e-05
AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin ...    45   1e-04

>AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA
           protein.
          Length = 641

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 232 VTLDCIPARDRMECLNYVQQRQADFVXVXPEXMYVA-AKYQSXLRRXXEYRXDEXPDA 402
           + ++C+  RDR++CL  ++QR+AD +   PE MY+A  +     R   E R  +  DA
Sbjct: 58  IRMECVAGRDRVDCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKDA 115


>AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin
           precursor protein.
          Length = 641

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 15/36 (41%), Positives = 26/36 (72%)
 Frame = +1

Query: 232 VTLDCIPARDRMECLNYVQQRQADFVXVXPEXMYVA 339
           + ++C+  RDR++CL  ++QR+AD +   PE MY+A
Sbjct: 58  IRMECVAGRDRVDCLELIEQRKADVLATEPEDMYIA 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,788,129
Number of Sequences: 53049
Number of extensions: 609964
Number of successful extensions: 1020
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)