Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F11
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 759 PEQIPPGXTWGXXEIVSPPXKXXXXXPSPKSHIPPGKFF 875
           P   PP  T G    V  P +     PSP S +PP +FF
Sbjct: 290 PVPFPPSPTIGNGA-VPKPAQEPRIPPSPTSALPPPQFF 327


>Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical
           protein Y41E3.16 protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 837 PSPKSHIPPGKFFGLPRPVP 896
           PSPK+  P G FF  P P P
Sbjct: 480 PSPKAQYPTGVFFNQPLPPP 499


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,745,360
Number of Sequences: 27780
Number of extensions: 307038
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)