Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F11
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        44   2e-06
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        44   2e-06
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        44   2e-06
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              24   1.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   6.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   8.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +1

Query: 232 VTLDCIPARDRMECLNYVQQRQADFVXVXPEXMYVAAK 345
           + + CI  RDR EC+  V +++AD V V PE MY+A K
Sbjct: 58  IPVSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVK 95



 Score = 33.5 bits (73), Expect = 0.003
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +3

Query: 402 PFRYXTVIVXH*DLPINXLXQLXXLXFRHNGNLXKTWENKSPLTML 539
           P+RY  V V H DLPIN +  L  L   H G + +    K P+T L
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLKSCHTG-VGRNVGYKIPITKL 164



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 506 NXGKQIPXNNADXSVAVFPK*TNPAFPPKENXLKALSXFLPK 631
           N G +IP      ++ V     +P +  +EN L+ALS    K
Sbjct: 154 NVGYKIPITKLT-AMGVLNNLHDPEYSARENELRALSSLFSK 194


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +1

Query: 232 VTLDCIPARDRMECLNYVQQRQADFVXVXPEXMYVAAK 345
           + + CI  RDR EC+  V +++AD V V PE MY+A K
Sbjct: 58  IPVSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVK 95



 Score = 33.5 bits (73), Expect = 0.003
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +3

Query: 402 PFRYXTVIVXH*DLPINXLXQLXXLXFRHNGNLXKTWENKSPLTML 539
           P+RY  V V H DLPIN +  L  L   H G + +    K P+T L
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLKSCHTG-VGRNVGYKIPITKL 164



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 506 NXGKQIPXNNADXSVAVFPK*TNPAFPPKENXLKALSXFLPK 631
           N G +IP      ++ V     +P +  +EN L+ALS    K
Sbjct: 154 NVGYKIPITKLT-AMGVLNNLHDPEYSARENELRALSSLFSK 194


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +1

Query: 232 VTLDCIPARDRMECLNYVQQRQADFVXVXPEXMYVAAK 345
           + + CI  RDR EC+  V +++AD V V PE MY+A K
Sbjct: 58  IPVSCISGRDRYECIEKVGKKEADVVAVDPEDMYLAVK 95



 Score = 33.5 bits (73), Expect = 0.003
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +3

Query: 402 PFRYXTVIVXH*DLPINXLXQLXXLXFRHNGNLXKTWENKSPLTML 539
           P+RY  V V H DLPIN +  L  L   H G + +    K P+T L
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLKSCHTG-VGRNVGYKIPITKL 164



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 506 NXGKQIPXNNADXSVAVFPK*TNPAFPPKENXLKALSXFLPK 631
           N G +IP      ++ V     +P +  +EN L+ALS    K
Sbjct: 154 NVGYKIPITKLT-AMGVLNNLHDPEYSARENELRALSSLFSK 194


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 99  LKYFILITLICACVNA 146
           +K F++I+ IC CV A
Sbjct: 1   MKTFVIISAICVCVGA 16


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  LKYFILITLICACVNA 146
           +K F++I  IC CV A
Sbjct: 1   MKTFVIIFAICVCVGA 16


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 99  LKYFILITLICACVNA 146
           +K  ++I+ IC CV+A
Sbjct: 1   MKTIVIISAICVCVSA 16


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  LKYFILITLICACVNA 146
           +K  ++I+ IC CV A
Sbjct: 1   MKTIVIISAICVCVGA 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,751
Number of Sequences: 438
Number of extensions: 3954
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)