Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_F10
(906 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 155 2e-36
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 130 5e-29
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 127 4e-28
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 105 1e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 100 1e-19
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 98 3e-19
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 87 6e-16
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 84 5e-15
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 83 1e-14
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 82 2e-14
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 78 4e-13
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 76 1e-12
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 71 4e-11
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 71 4e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 69 1e-10
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 67 7e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 66 2e-09
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 64 6e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 6e-09
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 63 1e-08
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 3e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 59 1e-07
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 3e-07
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 58 4e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 4e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 49 1e-04
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 46 0.001
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 43 0.009
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 40 0.066
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 37 0.62
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 1.9
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 34 4.3
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 7.6
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 155 bits (375), Expect = 2e-36
Identities = 77/106 (72%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 88 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 264
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 265 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 130 bits (314), Expect = 5e-29
Identities = 68/107 (63%), Positives = 80/107 (74%)
Frame = +1
Query: 82 LAFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 261
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 262 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSN LA MRK
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 127 bits (306), Expect = 4e-28
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = +1
Query: 172 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 351
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 352 AKRKREELSNXLAQMRK 402
AKRKREELSN L QM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 105 bits (253), Expect = 1e-21
Identities = 54/103 (52%), Positives = 71/103 (68%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 274 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
+E+L++SKDKRALKFLKRR+GTH RAK KREEL N + RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 99.5 bits (237), Expect = 1e-19
Identities = 54/100 (54%), Positives = 65/100 (65%)
Frame = +1
Query: 100 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 279
VG+ KGH TK + + RP+ KG TK FVR L+REVVG A YEKR
Sbjct: 12 VGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRIT 61
Query: 280 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMR 399
ELLKV KDKRALK KR+LGTH RAK+KREE++ + +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 97.9 bits (233), Expect = 3e-19
Identities = 54/100 (54%), Positives = 65/100 (65%)
Frame = +1
Query: 100 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 279
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 280 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMR 399
ELLKV KDKRALK KR+LGTH RAKRKREE+S+ L +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 87.0 bits (206), Expect = 6e-16
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = +1
Query: 178 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 357
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 358 RKREELSNXLAQMRK 402
RK EELS + + R+
Sbjct: 180 RKIEELSAVIVEQRR 194
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 83.8 bits (198), Expect = 5e-15
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
IAVGL KGH TT I + +RP+R KGL+TK + V +++REV G A YE+
Sbjct: 16 IAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFAPYERH 67
Query: 274 AMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
+EL+K S KRALKF K+RLGT RAK K +E+ + RK
Sbjct: 68 MIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 82.6 bits (195), Expect = 1e-14
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 148 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 327
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 328 RRLGTHIRAKRKREELSNXLAQMR 399
+RLGT RAK K EEL++ + R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.2 bits (194), Expect = 2e-14
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 202 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 381
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 382 XLAQMR 399
L R
Sbjct: 88 ALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 77.8 bits (183), Expect = 4e-13
Identities = 48/103 (46%), Positives = 62/103 (60%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
+A+GL KGHK K + K + P RL TKH+KFV+D++REV Y+
Sbjct: 7 MAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDFMSYDWC 56
Query: 274 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
+ L KVS DK A KF+K+R+G HI KRK EELS +A MRK
Sbjct: 57 TVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 76.2 bits (179), Expect = 1e-12
Identities = 44/103 (42%), Positives = 64/103 (62%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G + YE+R
Sbjct: 7 IAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGLSPYERR 56
Query: 274 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
++L++ S +KRA K K+RLG+ RAK K EE++N +A R+
Sbjct: 57 LIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +1
Query: 265 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSN LA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 70.9 bits (166), Expect = 4e-11
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 133 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 309
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 310 ALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
ALKF+++ LGTHI AKRK ELSN LA R+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 70.9 bits (166), Expect = 4e-11
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
IAVG GH TK S +K I K++ K+ + D+VRE+ G + YEKR
Sbjct: 13 IAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSPYEKR 60
Query: 274 AMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
+EL+KV KR+LK+ K++LGTH R K KREE+ + R+
Sbjct: 61 LIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +1
Query: 100 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 279
VGL KGH TK K + RP+ KG +K + FVR+L+REV G YEKR
Sbjct: 12 VGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRIT 61
Query: 280 ELLKVSKDKRALKFLKRRLGTHIRAKRKRE 369
ELLKV KDKRALK + ++G H + ++ E
Sbjct: 62 ELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 66.9 bits (156), Expect = 7e-10
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + YEKR
Sbjct: 6 IAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKR 58
Query: 274 AMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
+EL K + KD K+A K +RLGT+ R KRK E + N MRK
Sbjct: 59 IIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 65.7 bits (153), Expect = 2e-09
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +1
Query: 205 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 375
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 376 SNXLAQMRK 402
+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 63.7 bits (148), Expect = 6e-09
Identities = 39/103 (37%), Positives = 57/103 (55%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
I G KG+KTT+ A R D+ L K + V+ ++ ++VG + E+R
Sbjct: 15 IIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLVGFSPMERR 64
Query: 274 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMRK 402
ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 65 VQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 286 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 381
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 193 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 372
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 373 LSN 381
++N
Sbjct: 95 IAN 97
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 211 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 378
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 208 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXL 387
KH + V+ ++ ++VG + EKR E L+V K+KRALK+ K+RLG AK+KR ++ L
Sbjct: 38 KHLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEAL 97
Query: 388 AQMRK 402
K
Sbjct: 98 RHATK 102
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 124 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 294
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 295 SKDKRALKFLKRRLGTHIRA 354
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 57.6 bits (133), Expect = 4e-07
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 175 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 348
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 349 RAKRKREELSNXLAQ 393
RA +K L + +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 4e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 94 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 273
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 274 AMELLKV 294
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 49.2 bits (112), Expect = 1e-04
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +1
Query: 25 REFLRFKCGFGSVSPKSWLLAFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQ 204
RE +R C + ++ L + +AVGL KGHK +R ++ G
Sbjct: 44 REHVRQTCCHRRAAARA--LHYPMAVGLNKGHK-----------------VRHSQCHGSL 84
Query: 205 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 309
TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 85 TKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 202 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 378
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 379 NXLAQ 393
L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 292 VSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMR 399
V+K + L+ R+LGTH RAKRKREE+SN L +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 40.3 bits (90), Expect = 0.066
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 205 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNX 384
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SN
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 385 LAQMRK 402
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 37.1 bits (82), Expect = 0.62
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 202 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 378
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 379 NXL 387
+ L
Sbjct: 69 HIL 71
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 1.9
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 208 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 375
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 34.3 bits (75), Expect = 4.3
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +1
Query: 112 KGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 291
K KT + + G++ I D ++ + K + K+ R+LV + +AME ++
Sbjct: 50 KWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDRNLVAATI-------KAMERVE 100
Query: 292 VSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQ 393
+ +R F KRRLG + +RKREE +A+
Sbjct: 101 EIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 7.6
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 184 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 351
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 352 AKRKREEL 375
A+R REEL
Sbjct: 592 AERLREEL 599
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,257,619
Number of Sequences: 1657284
Number of extensions: 10258312
Number of successful extensions: 20473
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 20009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20457
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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